RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 ZNF365Q70YC5 407 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 KCTD6Q8NC69 237 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 MCRS1Q96EZ8 462 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 TRMT13Q9NUP7 481 aaKnown RBP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 MIOSQ9NXC5 875 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 M0QZ92 97 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 PIRO00625 290 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 CST8O60676 142 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 ANP32DO95626 131 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 GAS8O95995 478 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 ATF2P15336 505 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 IVDP26440 423 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 CD52P31358 61 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 TM4SF4P48230 202 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 ZNF268Q14587 947 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 TFDP3Q5H9I0 405 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 TAX1BP1Q86VP1 789 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 OSTM1Q86WC4 334 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 CCDC33Q8N5R6 958 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 EIF1ADQ8N9N8 165 aaKnown RBP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 ART4Q93070 314 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 TXLNGYQ9BZA5 131 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 SNX25Q9H3E2 840 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 HESX1Q9UBX0 185 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 CASTOR2A6NHX0 329 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 C3orf70A6NLC5 250 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 LIASO43766 372 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 MYCP01106 439 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 TKTP29401 623 aaKnown RBP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 LILRA4P59901 499 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 TAP1Q03518 808 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 P3H1Q32P28 736 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 SYCP2LQ5T4T6 812 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 AP1ARQ63HQ0 302 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 NPNTQ6UXI9 565 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 HASPINQ8TF76 798 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 MTRF1LQ9UGC7 380 aaKnown RBP12.23□□□□□ -0.45
SHMT2-212ENST00000554467 BAIAP2L1Q9UHR4 511 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 USP18Q9UMW8 372 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 Q9Y3F1 56 aa12.23□□□□□ -0.45
SHMT2-212ENST00000554467 FOXO6A8MYZ6 492 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 PAPSS1O43252 624 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-212ENST00000554467 TJP3O95049 919 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 CETN2P41208 172 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 CCNG2Q16589 344 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 WSCD1Q658N2 575 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 LRRC52Q8N7C0 313 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 APPL2Q8NEU8 664 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 SPC25Q9HBM1 224 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 TMBIM4Q9HC24 238 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHMT2-212ENST00000554467 DERAQ9Y315 318 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 TMEM88BA6NKF7 163 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 HGSO14964 777 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-212ENST00000554467 SEPT4O43236 478 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 CAND2O75155 1236 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 DNAJC8O75937 253 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-212ENST00000554467 RNF8O76064 485 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 HOXC8P31273 242 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 TAF6P49848 677 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 SCNN1GP51170 649 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 DRG2P55039 364 aaKnown RBP12.22□□□□□ -0.45
SHMT2-212ENST00000554467 ZC3H12AQ5D1E8 599 aaKnown RBP12.22□□□□□ -0.45
SHMT2-212ENST00000554467 ARMC3Q5W041 872 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 DENND2CQ68D51 928 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 TAF2Q6P1X5 1199 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 RFX6Q8HWS3 928 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 ADGRF2Q8IZF7 708 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 NIPA2Q8N8Q9 360 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 EPS8L3Q8TE67 593 aaKnown RBP12.22□□□□□ -0.45
SHMT2-212ENST00000554467 MAIP1Q8WWC4 291 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 SNF8Q96H20 258 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 RSRC1Q96IZ7 334 aaKnown RBP12.22□□□□□ -0.45
SHMT2-212ENST00000554467 ADAM33Q9BZ11 813 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 ANAPC5Q9UJX4 755 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 C15orf41Q9Y2V0 281 aa12.22□□□□□ -0.45
SHMT2-212ENST00000554467 SYNJ2BP-COX16A0A087WUM0 186 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 C5orf60A6NFR6 353 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 HMGB1P1B2RPK0 211 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-212ENST00000554467 GOLGA8MH3BSY2 632 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 SGK1O00141 431 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 TRPA1O75762 1119 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 STAU1O95793 577 aaKnown RBP12.21□□□□□ -0.45
SHMT2-212ENST00000554467 GPD1P21695 349 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 KDELR1P24390 212 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 AXLP30530 894 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 GABRB2P47870 512 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 GDF10P55107 478 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 OTUD4Q01804 1114 aaKnown RBP12.21□□□□□ -0.45
SHMT2-212ENST00000554467 MTMR3Q13615 1198 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 PTK6Q13882 451 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 CAPN12Q6ZSI9 719 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 CTU1Q7Z7A3 348 aaKnown RBP12.21□□□□□ -0.45
SHMT2-212ENST00000554467 CPLX4Q7Z7G2 160 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 ACTL9Q8TC94 416 aa12.21□□□□□ -0.45
SHMT2-212ENST00000554467 PABPC3Q9H361 631 aaKnown RBP12.21□□□□□ -0.45
SHMT2-212ENST00000554467 FAM105AQ9NUU6 356 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms