RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 SPOPO43791 374 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SNUPNO95149 360 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TTC4O95801 387 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PECAM1P16284 738 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CALB2P22676 271 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 IVDP26440 423 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TM4SF1P30408 202 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 HOXA13P31271 388 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CCNG1P51959 295 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 HSPA2P54652 639 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SUMO1P63165 101 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 MXRA7P84157 204 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 MYL7Q01449 175 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ICA1Q05084 483 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF543Q08ER8 600 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 STRN3Q13033 797 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CALCOCO2Q13137 446 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SLMAPQ14BN4 828 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TMED2Q15363 201 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DHCR24Q15392 516 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 QRICH1Q2TAL8 776 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 BBS9Q3SYG4 887 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 USH1GQ495M9 461 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 EPC2Q52LR7 807 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ASPRV1Q53RT3 343 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SEL1L2Q5TEA6 688 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CYP4F22Q6NT55 531 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TMEM154Q6P9G4 183 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 BTNL9Q6UXG8 535 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 C8orf86Q6ZUL3 223 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RFX8Q6ZV50 586 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PTF1AQ7RTS3 328 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 NECAB2Q7Z6G3 386 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SLC47A2Q86VL8 602 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 VSIG1Q86XK7 387 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SLC13A5Q86YT5 568 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PPM1KQ8N3J5 372 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 UBL4BQ8N7F7 174 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 GBP7Q8N8V2 638 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ATL2Q8NHH9 583 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PPP1R13LQ8WUF5 828 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CD101Q93033 1021 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SLC7A6OSQ96CW6 309 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 FAM84AQ96KN4 292 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 FGD4Q96M96 766 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 NUDCD1Q96RS6 583 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TSC22D3Q99576 134 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SH3GL3Q99963 347 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DPH2Q9BQC3 489 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TMEM109Q9BVC6 243 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TBC1D10AQ9BXI6 508 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 HEMGNQ9BXL5 484 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DENND2DQ9H6A0 471 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DDX4Q9NQI0 724 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PAPOLBQ9NRJ5 636 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CYP39A1Q9NYL5 469 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 NINJ2Q9NZG7 142 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ZIM2Q9NZV7 527 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DLGAP2Q9P1A6 1054 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SFMBT1Q9UHJ3 866 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PHTF1Q9UMS5 762 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF652Q9Y2D9 606 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 R3HDM2Q9Y2K5 976 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DIS3Q9Y2L1 958 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 LRRC42Q9Y546 428 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SBF2Q86WG5 1849 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ABCA3Q99758 1704 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SPATA31A1Q5TZJ5 1347 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PASKQ96RG2 1323 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 KLHL33A6NCF5 533 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 C2orf71A6NGG8 1288 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RASA4BC9J798 803 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 GABRDO14764 452 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 MEIS2O14770 477 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 LIN7AO14910 233 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ZBTB5O15062 677 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TMPRSS2O15393 492 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SLC16A3O15427 465 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CYP26A1O43174 497 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RASA4O43374 803 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DLX3O60479 287 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TBCAO75347 108 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RGS9O75916 674 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TTLL1O95922 423 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ALBP02768 609 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SNHG28P0DPA3 235 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RRM1P23921 792 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RPL13P26373 211 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RPA1P27694 616 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 SMARCA1P28370 1054 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 GCAP28676 217 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 GBP1P32455 592 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RPA3P35244 121 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PSMC2P35998 433 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 GCLMP48507 274 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PAPOLAP51003 745 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 POLGP54098 1239 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 GPC5P78333 572 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PPP3CAQ08209 521 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CYP4F3Q08477 520 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms