RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 YWHAQP27348 245 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 SOX9P48436 509 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 CCR3P51677 355 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 SLC7A9P82251 487 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 TNK2Q07912 1038 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 MTAPQ13126 283 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 RUNX3Q13761 415 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 SNX30Q5VWJ9 437 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 SPOPLQ6IQ16 392 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 TXNDC11Q6PKC3 985 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 ACOT1Q86TX2 421 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 ARL14EPQ8N8R7 260 aaPredicted RBP11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 FBXL13Q8NEE6 735 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 RIN3Q8TB24 985 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 OSCP1Q8WVF1 389 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 ATP2A3Q93084 1043 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 EXOC4Q96A65 974 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 SLC22A12Q96S37 553 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 MED10Q9BTT4 135 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 NT5C1AQ9BXI3 368 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 APOBEC3GQ9HC16 384 aaKnown RBP11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 CSNK1G1Q9HCP0 422 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 PNPLA8Q9NP80 782 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 HPS4Q9NQG7 708 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 PCDHGA2Q9Y5H1 932 aa11.04□□□□□ -0.64
PTCD2P1-201ENST00000554393 TNFRSF10BO14763 440 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 CILPO75339 1184 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 AP1G2O75843 785 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 PAPSS2O95340 614 aaPredicted RBP11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 IFNAR2P48551 515 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 TUBP50607 506 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 SLC5A3P53794 718 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 NRLP54845 237 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 CSTF1Q05048 431 aaKnown RBP11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 TAF10Q12962 218 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 CCINQ13939 588 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 ANKRD40Q6AI12 368 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 SPEM1Q8N4L4 309 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 CPA6Q8N4T0 437 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZBTB44Q8NCP5 570 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 SLC2A14Q8TDB8 520 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 SH3RF2Q8TEC5 729 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 ELMO3Q96BJ8 720 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 CYP2S1Q96SQ9 504 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 HNRNPABQ99729 332 aaKnown RBP11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 EBF3Q9H4W6 596 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 MMRN2Q9H8L6 949 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 KRT82Q9NSB4 513 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 RAB20Q9NX57 234 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZSCAN32Q9NX65 697 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 HMGXB4Q9UGU5 601 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 COQ4Q9Y3A0 265 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 R4GN57 208 aa11.03□□□□□ -0.64
PTCD2P1-201ENST00000554393 TRDMT1O14717 391 aaKnown RBP11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 LMNAP02545 664 aaKnown RBP11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 FAM200BP0CF97 657 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 TDGF1P13385 188 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 CCDC130P13994 396 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 PMS1P54277 932 aaKnown RBP11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 PON2Q15165 354 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 TMEM196Q5HYL7 178 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 TRIM68Q6AZZ1 485 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 DDX42Q86XP3 938 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 ZMIZ2Q8NF64 920 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 TTC8Q8TAM2 541 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 ERCC4Q92889 916 aaPredicted RBP11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 FBXO32Q969P5 355 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 EEF2KMTQ96G04 330 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 KCNK16Q96T55 309 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 SMOQ99835 787 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 DUSP9Q99956 384 aaKnown RBP11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 FBXO44Q9H4M3 255 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 ECT2Q9H8V3 914 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 DUS2Q9NX74 493 aaKnown RBP11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 ARMCX3Q9UH62 379 aaPredicted RBP11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 MAN1B1Q9UKM7 699 aa11.02□□□□□ -0.65
PTCD2P1-201ENST00000554393 ATG2BQ96BY7 2078 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 GPR179Q6PRD1 2367 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 TRIM49BA6NDI0 452 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 OTOL1A6NHN0 477 aaPredicted RBP11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 LEFTY2O00292 366 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 SLC9A3R1O14745 358 aaPredicted RBP11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 PMM2O15305 246 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 LILRB5O75023 590 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 NFATC1O95644 943 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 ZDHHC11BP0C7U3 371 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 ARSAP15289 507 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 GJA4P35212 333 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 CXCL12P48061 93 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 ZXDBP98169 803 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 GRSF1Q12849 480 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 NR1H3Q13133 447 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 ORC1Q13415 861 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 MORC3Q14149 939 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 GAS6Q14393 721 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 EML3Q32P44 896 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms