RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 ELMO3Q96BJ8 720 aa23.21■■□□□ 1.31
RCCD1-202ENST00000554302 ZFRQ96KR1 1074 aaKnown RBP23.21■■□□□ 1.31
RCCD1-202ENST00000554302 SMPD4Q9NXE4 827 aa23.21■■□□□ 1.31
RCCD1-202ENST00000554302 PCDHGA5Q9Y5G8 931 aa23.21■■□□□ 1.31
RCCD1-202ENST00000554302 ATP8B3O60423 1300 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 FAM237AA0A1B0GTK4 181 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 ABL1P00519 1130 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 NR3C1P04150 777 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 RPN1P04843 607 aaKnown RBP23.2■■□□□ 1.3
RCCD1-202ENST00000554302 ZDHHC11BP0C7U3 371 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 EIF2DP41214 584 aaKnown RBP23.2■■□□□ 1.3
RCCD1-202ENST00000554302 LIMK1P53667 647 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 SGSM1Q2NKQ1 1148 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 PLK5Q496M5 336 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 C1orf220Q5T0J3 134 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 RHBDF2Q6PJF5 856 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 CRYBG2Q8N1P7 616 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 SCAMP5Q8TAC9 235 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 TAF4BQ92750 862 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 FBXO32Q969P5 355 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 SMARCD1Q96GM5 515 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 DUSP9Q99956 384 aaKnown RBP23.2■■□□□ 1.3
RCCD1-202ENST00000554302 DUSP15Q9H1R2 295 aaPredicted RBP23.2■■□□□ 1.3
RCCD1-202ENST00000554302 DMAP1Q9NPF5 467 aaPredicted RBP23.2■■□□□ 1.3
RCCD1-202ENST00000554302 COMMD8Q9NX08 183 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 CFAP97Q9P2B7 532 aa23.2■■□□□ 1.3
RCCD1-202ENST00000554302 SPTBN2O15020 2390 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 A0A0A0MRY4 1105 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 ANTXRLA6NF34 631 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 IKBKBO14920 756 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 COCHO43405 550 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 SLC5A3P53794 718 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 IFRD2Q12894 506 aaPredicted RBP23.19■■□□□ 1.3
RCCD1-202ENST00000554302 SCARA5Q6ZMJ2 495 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 SV2AQ7L0J3 742 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 SPRYD3Q8NCJ5 442 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 ZMIZ2Q8NF64 920 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 CSNK1G1Q9HCP0 422 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 TRAF3IP3Q9Y228 551 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 ZDHHC9Q9Y397 364 aa23.19■■□□□ 1.3
RCCD1-202ENST00000554302 E2F8A0AVK6 867 aa23.18■■□□□ 1.3
RCCD1-202ENST00000554302 MAPK13O15264 365 aa23.18■■□□□ 1.3
RCCD1-202ENST00000554302 ASS1P00966 412 aaKnown RBP23.18■■□□□ 1.3
RCCD1-202ENST00000554302 MBL2P11226 248 aaPredicted RBP23.18■■□□□ 1.3
RCCD1-202ENST00000554302 TUBP50607 506 aa23.18■■□□□ 1.3
RCCD1-202ENST00000554302 MESP2Q0VG99 397 aa23.18■■□□□ 1.3
RCCD1-202ENST00000554302 SF3A2Q15428 464 aaKnown RBP23.18■■□□□ 1.3
RCCD1-202ENST00000554302 ACOT1Q86TX2 421 aa23.18■■□□□ 1.3
RCCD1-202ENST00000554302 UNC93AQ86WB7 457 aa23.18■■□□□ 1.3
RCCD1-202ENST00000554302 RASSF3Q86WH2 238 aa23.18■■□□□ 1.3
RCCD1-202ENST00000554302 TBC1D14Q9P2M4 693 aa23.18■■□□□ 1.3
RCCD1-202ENST00000554302 CHORDC1Q9UHD1 332 aaPredicted RBP23.18■■□□□ 1.3
RCCD1-202ENST00000554302 P4HA1P13674 534 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 SLC6A11P48066 632 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 NFIL3Q16649 462 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 HECTD3Q5T447 861 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 OTUB2Q96DC9 234 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 PNKPQ96T60 521 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 SMOQ99835 787 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 MED10Q9BTT4 135 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 RXFP3Q9NSD7 469 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 HMGXB4Q9UGU5 601 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 MMP17Q9ULZ9 603 aa23.17■■□□□ 1.3
RCCD1-202ENST00000554302 SCAMP3O14828 347 aaKnown RBP23.16■■□□□ 1.3
RCCD1-202ENST00000554302 TM4SF5O14894 197 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 AP1G2O75843 785 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 BEST1O76090 585 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 RHOBTB3O94955 611 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 ADRB1P08588 477 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 ASPAP45381 313 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 NDST1P52848 882 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 MRPS21P82921 87 aaKnown RBP23.16■■□□□ 1.3
RCCD1-202ENST00000554302 CCDC6Q16204 474 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 C2orf27AQ580R0 203 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 C12orf40Q86WS4 652 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 SFTPA1Q8IWL2 248 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 TSTD1Q8NFU3 115 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 CHAMP1Q96JM3 812 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 SPATA32Q96LK8 384 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 CCSER2Q9H7U1 834 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 KRT82Q9NSB4 513 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 SDK1Q7Z5N4 2213 aa23.16■■□□□ 1.3
RCCD1-202ENST00000554302 DCLK1O15075 740 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 CALUO43852 315 aaPredicted RBP23.15■■□□□ 1.3
RCCD1-202ENST00000554302 ADH1CP00326 375 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 CCDC130P13994 396 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 MPLP40238 635 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 SEC13P55735 322 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 MCCD1P59942 119 aaPredicted RBP23.15■■□□□ 1.3
RCCD1-202ENST00000554302 KRT85P78386 507 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 CRY1Q16526 586 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 AASDHQ4L235 1098 aaPredicted RBP23.15■■□□□ 1.3
RCCD1-202ENST00000554302 PPM1JQ5JR12 505 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 SPOPLQ6IQ16 392 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 PHTF2Q8N3S3 785 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 SLC2A14Q8TDB8 520 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 CNOT6LQ96LI5 555 aaKnown RBP23.15■■□□□ 1.3
RCCD1-202ENST00000554302 VPS45Q9NRW7 570 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 GMIPQ9P107 970 aa23.15■■□□□ 1.3
RCCD1-202ENST00000554302 FRMD4BQ9Y2L6 1034 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms