RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 TRIM24O15164 1050 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 KAT7O95251 611 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 KLF8O95600 359 aaPredicted RBP12.32□□□□□ -0.44
TUBB3-204ENST00000554116 PFKLP17858 780 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 TIE1P35590 1138 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 PGFP49763 221 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 FAM193AP78312 1265 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 DNM1Q05193 864 aaKnown RBP12.32□□□□□ -0.44
TUBB3-204ENST00000554116 TAF10Q12962 218 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 SHC4Q6S5L8 630 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 MIB1Q86YT6 1006 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 GPD1LQ8N335 351 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 KIAA1958Q8N8K9 716 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 FSIP1Q8NA03 581 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 MYCBPAPQ8TBZ2 947 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 C8orf48Q96LL4 319 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 CEP295NLQ96MC4 621 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 DPEP3Q9H4B8 488 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 NEUROG3Q9Y4Z2 214 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
TUBB3-204ENST00000554116 HELZ2Q9BYK8 2649 aaKnown RBP12.31□□□□□ -0.44
TUBB3-204ENST00000554116 PLXNB3Q9ULL4 1909 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 APC2O95996 2303 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 CFAP46Q8IYW2 2715 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 TAF4O00268 1085 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 CLDN5O00501 218 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 TNFRSF10BO14763 440 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 HYAL3O43820 417 aaPredicted RBP12.31□□□□□ -0.44
TUBB3-204ENST00000554116 ENGP17813 658 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 ITPKAP23677 461 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 GRIK1P39086 918 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 EIF2DP41214 584 aaKnown RBP12.31□□□□□ -0.44
TUBB3-204ENST00000554116 ME1P48163 572 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 TRIM61Q5EBN2 209 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 MDH1BQ5I0G3 518 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 C4orf50Q6ZRC1 276 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 PAQR9Q6ZVX9 377 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 ARMCX6Q7L4S7 300 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 TRAPPC11Q7Z392 1133 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 IQUBQ8NA54 791 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 DHX58Q96C10 678 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 P2RY11Q96G91 374 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 PNKPQ96T60 521 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 B3GNT5Q9BYG0 378 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 LRRC27Q9C0I9 530 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 CUEDC2Q9H467 287 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 PANK4Q9NVE7 773 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 FAM13BQ9NYF5 915 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 CFAP97Q9P2B7 532 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 PILRBQ9UKJ0 227 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 KLK13Q9UKR3 277 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 EXOC7Q9UPT5 735 aa12.31□□□□□ -0.44
TUBB3-204ENST00000554116 ATXN2Q99700 1313 aaKnown RBP12.31□□□□□ -0.44
TUBB3-204ENST00000554116 SPAARA0A1B0GVQ0 90 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-204ENST00000554116 TGFB1I1O43294 461 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 GREM1O60565 184 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 TACC1O75410 805 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 AMPD3Q01432 767 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 CYP27A1Q02318 531 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 E2F4Q16254 413 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 LY6G5CQ5SRR4 150 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 KIAA1211LQ6NV74 962 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 SLC23A3Q6PIS1 610 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 EPM2AIP1Q7L775 607 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-204ENST00000554116 TTC30AQ86WT1 665 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 SYT12Q8IV01 421 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 CCDC65Q8IXS2 484 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 TRIM9Q9C026 710 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 KBTBD4Q9NVX7 518 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 IL37Q9NZH6 218 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 HSPBP1Q9NZL4 362 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 RCOR1Q9UKL0 485 aa12.3□□□□□ -0.44
TUBB3-204ENST00000554116 ACACAQ13085 2346 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 A0A1W2PQF6 199 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 FAM221BA6H8Z2 402 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 ZNF233A6NK53 670 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 UPK3BL1B0FP48 263 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 UPK3BL2E5RIL1 263 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 POLR2DO15514 142 aaKnown RBP12.29□□□□□ -0.44
TUBB3-204ENST00000554116 COCHO43405 550 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 ZDHHC11BP0C7U3 371 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
TUBB3-204ENST00000554116 GABRG2P18507 467 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 GNL1P36915 607 aaPredicted RBP12.29□□□□□ -0.44
TUBB3-204ENST00000554116 GRIA2P42262 883 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 TNFRSF4P43489 277 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 MAPK8P45983 427 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 KDSRQ06136 332 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
TUBB3-204ENST00000554116 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms