RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RGPD5Q99666 1765 aa9.93□□□□□ -0.82
SIX4-202ENST00000554079 ASTN2O75129 1339 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 H3BMQ9 156 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 SCO2O43819 266 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 JRKO75564 520 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 UFL1O94874 794 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 PRKCAP17252 672 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 PSMC3P17980 439 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 AOC1P19801 751 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 EPHB1P54762 984 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 DLG4P78352 724 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 EPHA7Q15375 998 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 PCSK7Q16549 785 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 CCNG2Q16589 344 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 AARS2Q5JTZ9 985 aaKnown RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 GPR141Q7Z602 305 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 ANKS1BQ7Z6G8 1248 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 HIPK4Q8NE63 616 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 ADCY4Q8NFM4 1077 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 GABPB2Q8TAK5 448 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 GSDMBQ8TAX9 411 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 GIPC2Q8TF65 315 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 TMA16Q96EY4 203 aaKnown RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 COG8Q96MW5 612 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 PNMA5Q96PV4 448 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 HERC2P3Q9BVR0 1158 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 FGFBP2Q9BYJ0 223 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 GCOM2Q9BZD3 368 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 WNT8AQ9H1J5 351 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 C12orf10Q9HB07 376 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 CD209Q9NNX6 404 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 ALG13Q9NP73 1137 aaKnown RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 TAS2R14Q9NYV8 317 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 HACD3Q9P035 362 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 PSMC3IPQ9P2W1 217 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 SLC24A2Q9UI40 661 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 DAPK2Q9UIK4 370 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 HDAC9Q9UKV0 1011 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 PTPRFP10586 1907 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 A0A1W2PPW3 197 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 ANKRD62A6NC57 917 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 FSCN2O14926 492 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 DYNC1LI2O43237 492 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 MSI1O43347 362 aaKnown RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 SPOPO43791 374 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 TMCC2O75069 709 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 FYNP06241 537 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 OR52Z1P0C646 297 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 DDX5P17844 614 aaKnown RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 BGNP21810 368 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 COMTP21964 271 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 IFNA8P32881 189 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 ETV4P43268 484 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 BNIP3Q12983 259 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 COASYQ13057 564 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 ITGADQ13349 1161 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 SCARA3Q6AZY7 606 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 GJB7Q6PEY0 223 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 SETD3Q86TU7 594 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 ZCCHC9Q8N567 271 aaKnown RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 BANPQ8N9N5 519 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 ANGPTL6Q8NI99 470 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 CAPSLQ8WWF8 208 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 TP53INP1Q96A56 240 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 ZNF486Q96H40 463 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 GLT8D2Q9H1C3 349 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 TP63Q9H3D4 680 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 CHST7Q9NS84 486 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.92□□□□□ -0.82
SIX4-202ENST00000554079 TBC1D14Q9P2M4 693 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 PPME1Q9Y570 386 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 CAMTA1Q9Y6Y1 1673 aa9.92□□□□□ -0.82
SIX4-202ENST00000554079 FER1L6Q2WGJ9 1857 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 GOLGA8MH3BSY2 632 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 PRKAB2O43741 272 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 IDH3BO43837 385 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 KLHL41O60662 606 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 DDAH1O94760 285 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 MYO1DO94832 1006 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 ATP5BP06576 529 aaKnown RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 NAGAP17050 411 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 TPTEP56180 551 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 CDK18Q07002 472 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 STX3Q13277 289 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 SGO2Q562F6 1265 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 FGD3Q5JSP0 725 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 EFHC2Q5JST6 749 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 CYP4A22Q5TCH4 519 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 IZUMO3Q5VZ72 239 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 SLC30A10Q6XR72 485 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 AGMOQ6ZNB7 445 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 TOM1L2Q6ZVM7 507 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 CYP4V2Q6ZWL3 525 aaPredicted RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 CARM1Q86X55 608 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 CPNE8Q86YQ8 564 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 ZFPM1Q8IX07 1006 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 MINDY2Q8NBR6 621 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 ZNF420Q8TAQ5 688 aaPredicted RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 HM13Q8TCT9 377 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms