RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 ADAMTS14Q8WXS8 1223 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ELSPBP1Q96BH3 223 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 MISP3Q96FF7 219 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 MSANTD3Q96H12 275 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FAM84AQ96KN4 292 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 POLR3FQ9H1D9 316 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CXCL16Q9H2A7 254 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ZSWIM4Q9H7M6 989 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 KCNMB3Q9NPA1 279 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GPRC5CQ9NQ84 441 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SNTG2Q9NY99 539 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 DNMT3BQ9UBC3 853 aaKnown RBP6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GDAQ9Y2T3 454 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SNX14Q9Y5W7 946 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CDY1Q9Y6F8 540 aa6.11□□□□□ -1.43
SMARCE1P3-201ENST00000553649 NID2Q14112 1375 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ZMYM2Q9UBW7 1377 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 NCANO14594 1321 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 A0A1B0GUA9 196 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ZNF503-AS2A6NEH8 195 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 B8ZZF3 427 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 I3L4J1 428 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PRRG1O14668 218 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TBX3O15119 743 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 EXTL3O43909 919 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 USO1O60763 962 aaKnown RBP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TNFRSF21O75509 655 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RECQL4O94761 1208 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 B3GAT3O94766 335 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 DEXIO95424 95 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CCDC192P0DO97 292 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GP1BBP13224 206 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CEBPBP17676 345 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 IGFBP6P24592 240 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PSMA5P28066 241 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RDXP35241 583 aaKnown RBP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CSRP3P50461 194 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 IRX4P78413 519 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PCBP1Q15365 356 aaKnown RBP eCLIP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 NPY5RQ15761 445 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GLRA4Q5JXX5 417 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TANGO2Q6ICL3 276 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PPP4R3AQ6IN85 833 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 C1orf228Q6PIY5 440 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 MOXD1Q6UVY6 613 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 NOSTRINQ8IVI9 506 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PIGOQ8TEQ8 1089 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ANP32BQ92688 251 aaKnown RBP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 HAS1Q92839 578 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 MRRFQ96E11 262 aaKnown RBP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FAM20AQ96MK3 541 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FAM129BQ96TA1 746 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SLC38A3Q99624 504 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 EIF2AK1Q9BQI3 630 aaKnown RBP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CORO1BQ9BR76 489 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SEMA4CQ9C0C4 833 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 BRD9Q9H8M2 597 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GJB4Q9NTQ9 266 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GDE1Q9NZC3 331 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ANKMY1Q9P2S6 941 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FOXD3Q9UJU5 478 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PIAS3Q9Y6X2 628 aa6.1□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RALGAPA1Q6GYQ0 2036 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 MTCL1Q9Y4B5 1905 aaKnown RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 COL5A1P20908 1838 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PRRG2O14669 202 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PTGESO14684 152 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 DCLK1O15075 740 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SLITRK3O94933 977 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 BAG4O95429 457 aaKnown RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 LRG1P02750 347 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 THP07101 528 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RHOP08100 348 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 EDN3P14138 238 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GCFC2P16383 781 aaKnown RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CCNE1P24864 410 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TKTP29401 623 aaKnown RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GDI1P31150 447 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ELF1P32519 619 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 HSPA4P34932 840 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ARL2P36404 184 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 VIPR2P41587 438 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PCDH1Q08174 1060 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CYP4F3Q08477 520 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ELAVL2Q12926 359 aaKnown RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PRPF4BQ13523 1007 aaKnown RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RAB33AQ14088 237 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 TOB2Q14106 344 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 POU4F3Q15319 338 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 FAM78AQ5JUQ0 283 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 GALNT17Q6IS24 598 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PDXDC1Q6P996 788 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 CPLX2Q6PUV4 134 aaKnown RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 RTL10Q7L3V2 364 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 ZBTB8OSQ8IWT0 167 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 SLFN12Q8IYM2 578 aa6.09□□□□□ -1.43
SMARCE1P3-201ENST00000553649 PNPLA1Q8N8W4 532 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms