RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 NHLH2Q02577 135 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 OCA2Q04671 838 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 MAPK7Q13164 816 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 DLGAP5Q15398 846 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 CERCAMQ5T4B2 595 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 TSHZ3Q63HK5 1081 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 RINT1Q6NUQ1 792 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 DSTYKQ6XUX3 929 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 KRBA2Q6ZNG9 492 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 RRAGAQ7L523 313 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 FUKQ8N0W3 1084 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 SPARTQ8N0X7 666 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.41□□□□□ -1.7
TDP1-207ENST00000553617 OR56A1Q8NGH5 318 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 SUN3Q8TAQ9 357 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 ABHD5Q8WTS1 349 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 MIEF2Q96C03 454 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 NEUROD6Q96NK8 337 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 ELAC1Q9H777 363 aaKnown RBP4.41□□□□□ -1.7
TDP1-207ENST00000553617 GBA2Q9HCG7 927 aaPredicted RBP4.41□□□□□ -1.7
TDP1-207ENST00000553617 SSX2IPQ9Y2D8 614 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 CHST2Q9Y4C5 530 aa4.41□□□□□ -1.7
TDP1-207ENST00000553617 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.41□□□□□ -1.7
TDP1-207ENST00000553617 PRAMEF33A0A0G2JMD5 474 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 CCDC196A0A1B0GTZ2 297 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 GXYLT2A0PJZ3 443 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 DIRC3C9JPN6 131 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 E7EVH7 732 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 F5H0A9 414 aaPredicted RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 ZNF185O15231 689 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 LAMTOR5O43504 91 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 TIMM44O43615 452 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 RGS10O43665 173 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 PRAMEF10O60809 474 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 PPP6R2O75170 966 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 FARP2O94887 1054 aaPredicted RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 TFRCP02786 760 aaKnown RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 ELANEP08246 267 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 RXRAP19793 462 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 RBL1P28749 1068 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 UQCRC1P31930 480 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 KCNC1P48547 511 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 MCM2P49736 904 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 PGDP52209 483 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 PRKAG1P54619 331 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 ADAM17P78536 824 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 HSD11B2P80365 405 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 SLC12A1Q13621 1099 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 DYRK1AQ13627 763 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 CCNIQ14094 377 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 KCTD2Q14681 263 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 HLXQ14774 488 aaPredicted RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 NRN1LQ496H8 165 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 NT5DC1Q5TFE4 455 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 ARHGAP40Q5TG30 622 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 SFRP4Q6FHJ7 346 aaPredicted RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 RGS7BPQ6MZT1 257 aaPredicted RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 MSANTD2Q6P1R3 559 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 SLC15A3Q8IY34 581 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 D2HGDHQ8N465 521 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 TMEM57Q8N5G2 664 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 CEP70Q8NHQ1 597 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 TMEM171Q8WVE6 324 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 WDR60Q8WVS4 1066 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 CENPIQ92674 756 aaPredicted RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 SECISBP2LQ93073 1101 aaKnown RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 C3orf49Q96BT1 292 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 RRP36Q96EU6 259 aaKnown RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 GNRHR2Q96P88 292 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 OSBPL9Q96SU4 736 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 ZSWIM1Q9BR11 485 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 REEP2Q9BRK0 252 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 PAAF1Q9BRP4 392 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 TTPALQ9BTX7 342 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 ZCWPW1Q9H0M4 648 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 ABHD16BQ9H3Z7 469 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 TBC1D22BQ9NU19 505 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 RIMKLBQ9ULI2 386 aa4.4□□□□□ -1.71
TDP1-207ENST00000553617 USP15Q9Y4E8 981 aaPredicted RBP4.4□□□□□ -1.71
TDP1-207ENST00000553617 LMTK3Q96Q04 1460 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 EFCAB8A8MWE9 144 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 TOR1BO14657 336 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 ZSCAN9O15535 394 aaPredicted RBP4.39□□□□□ -1.71
TDP1-207ENST00000553617 CYP21A2P08686 494 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 ADORA2AP29274 412 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 SERPINA4P29622 427 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 NTSR1P30989 418 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 APOBEC3AP31941 199 aaPredicted RBP4.39□□□□□ -1.71
TDP1-207ENST00000553617 MAN2A2P49641 1150 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 NDUFV1P49821 464 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 PDE6CP51160 858 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 E2F2Q14209 437 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 CLCA4Q14CN2 919 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 GALNTL6Q49A17 601 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 L1TD1Q5T7N2 865 aaKnown RBP4.39□□□□□ -1.71
TDP1-207ENST00000553617 TCTN3Q6NUS6 607 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms