RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 LUZP1Q86V48 1076 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 MFSD6LQ8IWD5 586 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 CELF5Q8N6W0 485 aaKnown RBP24.06■■□□□ 1.44
TDP1-206ENST00000553569 PCMTD1Q96MG8 357 aaPredicted RBP24.06■■□□□ 1.44
TDP1-206ENST00000553569 LRRC3BQ96PB8 259 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 BRD9Q9H8M2 597 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 TDP1Q9NUW8 608 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 SCML2Q9UQR0 700 aa24.06■■□□□ 1.44
TDP1-206ENST00000553569 UCHL3P15374 230 aa24.05■■□□□ 1.44
TDP1-206ENST00000553569 PDE6CP51160 858 aa24.05■■□□□ 1.44
TDP1-206ENST00000553569 SYCP1Q15431 976 aa24.05■■□□□ 1.44
TDP1-206ENST00000553569 BPIFB1Q8TDL5 484 aa24.05■■□□□ 1.44
TDP1-206ENST00000553569 SECISBP2LQ93073 1101 aaKnown RBP24.05■■□□□ 1.44
TDP1-206ENST00000553569 KIF9Q9HAQ2 790 aa24.05■■□□□ 1.44
TDP1-206ENST00000553569 FAM207AQ9NSI2 230 aaPredicted RBP24.05■■□□□ 1.44
TDP1-206ENST00000553569 OBP2AQ9NY56 170 aa24.05■■□□□ 1.44
TDP1-206ENST00000553569 TICRRQ7Z2Z1 1910 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 ZNF263O14978 683 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 GPR37L1O60883 481 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 OAS1P00973 400 aaKnown RBP24.04■■□□□ 1.44
TDP1-206ENST00000553569 RFX1P22670 979 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 PGFP49763 221 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 DRAP1Q14919 205 aaPredicted RBP24.04■■□□□ 1.44
TDP1-206ENST00000553569 PKDCCQ504Y2 493 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 SIX5Q8N196 739 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 UBXN6Q9BZV1 441 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 GANQ9H2C0 597 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 LRRC4Q9HBW1 653 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 PLCB1Q9NQ66 1216 aa24.04■■□□□ 1.44
TDP1-206ENST00000553569 TLR8Q9NR97 1041 aaKnown RBP24.04■■□□□ 1.44
TDP1-206ENST00000553569 KIF26AQ9ULI4 1882 aaPredicted RBP24.03■■□□□ 1.44
TDP1-206ENST00000553569 A0A1W2PQH9 124 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 FOXN3O00409 490 aaPredicted RBP24.03■■□□□ 1.44
TDP1-206ENST00000553569 MED7O43513 233 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 PDGFBP01127 241 aaPredicted RBP24.03■■□□□ 1.44
TDP1-206ENST00000553569 ZDHHC11BP0C7U3 371 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 PFKLP17858 780 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 PLA2G4AP47712 749 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 RGS7P49802 495 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 TKTL1P51854 596 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 TPM4P67936 248 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 PFKPQ01813 784 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 ZNF268Q14587 947 aaPredicted RBP24.03■■□□□ 1.44
TDP1-206ENST00000553569 HECTD3Q5T447 861 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 RIN3Q8TB24 985 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 ZFYVE19Q96K21 471 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 RNF38Q9H0F5 515 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 CCSER2Q9H7U1 834 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 ARHGEF3Q9NR81 526 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 SMPD4Q9NXE4 827 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 WNT16Q9UBV4 365 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 SIK3Q9Y2K2 1263 aa24.03■■□□□ 1.44
TDP1-206ENST00000553569 LRRC10BA6NIK2 292 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 COCHO43405 550 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 MBL2P11226 248 aaPredicted RBP24.02■■□□□ 1.44
TDP1-206ENST00000553569 FCHO2Q0JRZ9 810 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 ADIGQ0VDE8 80 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 RAB41Q5JT25 222 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 IER5LQ5T953 404 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 SNX30Q5VWJ9 437 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 DENND1BQ6P3S1 775 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 HFE2Q6ZVN8 426 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 CCDC186Q7Z3E2 898 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 SH3RF2Q8TEC5 729 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 ZNF606Q8WXB4 792 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 PBXIP1Q96AQ6 731 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 NAA15Q9BXJ9 866 aaKnown RBP24.02■■□□□ 1.44
TDP1-206ENST00000553569 ULBP1Q9BZM6 244 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 NACA2Q9H009 215 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 MFSD1Q9H3U5 465 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 NMUR1Q9HB89 426 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 NAGPAQ9UK23 515 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 ARHGAP26Q9UNA1 814 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 CPQQ9Y646 472 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 USP3Q9Y6I4 520 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 COL4A3Q01955 1670 aa24.02■■□□□ 1.44
TDP1-206ENST00000553569 KRBA1A5PL33 1030 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 PRR33A8MZF0 331 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 PIK3R2O00459 728 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 EPHB6O15197 1021 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 CAVIN2O95810 425 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 OLFM2O95897 454 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 LCP1P13796 627 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 POLR2FP61218 127 aaKnown RBP24.01■■□□□ 1.43
TDP1-206ENST00000553569 PTK2Q05397 1052 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 USP4Q13107 963 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 ZNF77Q15935 545 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 SIX6OS1Q8N1H7 587 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 IRF7Q92985 503 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 LRFN3Q9BTN0 628 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 THG1LQ9NWX6 298 aaKnown RBP24.01■■□□□ 1.43
TDP1-206ENST00000553569 OSER1Q9NX31 292 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 COL4A2P08572 1712 aa24.01■■□□□ 1.43
TDP1-206ENST00000553569 F8VZ95 297 aa24■■□□□ 1.43
TDP1-206ENST00000553569 GOLGA6L19H0YKK7 550 aa24■■□□□ 1.43
TDP1-206ENST00000553569 CHADO15335 359 aa24■■□□□ 1.43
TDP1-206ENST00000553569 TLR5O60602 858 aa24■■□□□ 1.43
TDP1-206ENST00000553569 CLCN1P35523 988 aa24■■□□□ 1.43
TDP1-206ENST00000553569 TUBP50607 506 aa24■■□□□ 1.43
TDP1-206ENST00000553569 SLC7A9P82251 487 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms