RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 PPHLN1Q8NEY8 458 aaKnown RBP4.5□□□□□ -1.69
PCNX4-206ENST00000553513 SLC30A5Q8TAD4 765 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 POC1BQ8TC44 478 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 ZNF764Q96H86 408 aaPredicted RBP4.5□□□□□ -1.69
PCNX4-206ENST00000553513 FBXL20Q96IG2 436 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 MPP4Q96JB8 637 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 PGBD1Q96JS3 809 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 PRPF18Q99633 342 aaKnown RBP4.5□□□□□ -1.69
PCNX4-206ENST00000553513 VKORC1Q9BQB6 163 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 MAGEH1Q9H213 219 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 CHST8Q9H2A9 424 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 R3HDMLQ9H3Y0 253 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 SMURF2Q9HAU4 748 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 GPR35Q9HC97 309 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 ALG13Q9NP73 1137 aaKnown RBP4.5□□□□□ -1.69
PCNX4-206ENST00000553513 XPR1Q9UBH6 696 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 MID2Q9UJV3 735 aa4.5□□□□□ -1.69
PCNX4-206ENST00000553513 LRRFIP2Q9Y608 721 aaKnown RBP4.5□□□□□ -1.69
PCNX4-206ENST00000553513 SPATA31A3Q5VYP0 1347 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 A0A087WWL8 130 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 LOC102723971A0A1B0GUV8 181 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 ACKR2O00590 384 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 TRIM38O00635 465 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 PIP5K1BO14986 540 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 SOAT2O75908 522 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 NDST3O95803 873 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 AGR2O95994 175 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 XBP1P17861 261 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 CD38P28907 300 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 NPTX2P47972 431 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 HTRA4P83105 476 aaPredicted RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 ITIH3Q06033 890 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 DDX10Q13206 875 aaKnown RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 ARHGEF7Q14155 803 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 POSTNQ15063 836 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 RAB30Q15771 203 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 MGAT5BQ3V5L5 792 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 CACHD1Q5VU97 1274 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 KAZNQ674X7 775 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 SYCE2Q6PIF2 218 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 TTC30AQ86WT1 665 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 MICU3Q86XE3 530 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 CLASRPQ8N2M8 674 aaKnown RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 BOLLQ8N9W6 283 aaKnown RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 B3GALNT2Q8NCR0 500 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 NAXEQ8NCW5 288 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 TOR1AIP2Q8NFQ8 470 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 FAM71BQ8TC56 605 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 IPO4Q8TEX9 1081 aaKnown RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 LPIN2Q92539 896 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 MAML1Q92585 1016 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 USP13Q92995 863 aaPredicted RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 LRIG1Q96JA1 1093 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 SENP7Q9BQF6 1050 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 SORBS1Q9BX66 1292 aaKnown RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 PRDM13Q9H4Q3 707 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 SEPSECSQ9HD40 501 aaKnown RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 NECTIN3Q9NQS3 549 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 SLC17A6Q9P2U8 582 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 GRHPRQ9UBQ7 328 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 FBXO9Q9UK97 447 aaPredicted RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 SHOC2Q9UQ13 582 aa4.49□□□□□ -1.69
PCNX4-206ENST00000553513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 COL11A2P13942 1736 aaPredicted RBP4.49□□□□□ -1.69
PCNX4-206ENST00000553513 A0A0B4J269 797 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 RRN3P2A6NIE6 340 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 AQP7P3A6NL99 342 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 TMEM233B4DJY2 109 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 EIF3FO00303 357 aaPredicted RBP4.48□□□□□ -1.69
PCNX4-206ENST00000553513 MGST3O14880 152 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 NPC1O15118 1278 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 RGS10O43665 173 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 TRIAP1O43715 76 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 CCNT2O60583 730 aaKnown RBP4.48□□□□□ -1.69
PCNX4-206ENST00000553513 COQ9O75208 318 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 VPS4BO75351 444 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 ITGA2BP08514 1039 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 PIM1P11309 404 aaPredicted RBP4.48□□□□□ -1.69
PCNX4-206ENST00000553513 PPP3CBP16298 524 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 MAN1A1P33908 653 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 SERPINF1P36955 418 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 CASP2P42575 452 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 PTH2RP49190 550 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 CPT1AP50416 773 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 PAPOLAP51003 745 aaKnown RBP4.48□□□□□ -1.69
PCNX4-206ENST00000553513 COPAP53621 1224 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 WNT3P56703 355 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 NXPH1P58417 271 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 TUBB3Q13509 450 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 PTK2BQ14289 1009 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 PTPRRQ15256 657 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 TAF5Q15542 800 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 L1TD1Q5T7N2 865 aaKnown RBP4.48□□□□□ -1.69
PCNX4-206ENST00000553513 SLC30A10Q6XR72 485 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 RSRC2Q7L4I2 434 aaKnown RBP4.48□□□□□ -1.69
PCNX4-206ENST00000553513 MAATS1Q7Z4T9 603 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 GRASPQ7Z6J2 395 aaPredicted RBP4.48□□□□□ -1.69
PCNX4-206ENST00000553513 TICAM2Q86XR7 235 aa4.48□□□□□ -1.69
PCNX4-206ENST00000553513 KRT73Q86Y46 540 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms