RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TERB1Q8NA31 727 aa7.91□□□□□ -1.14
PCNX1-205ENST00000553508 PNLDC1Q8NA58 520 aaKnown RBP7.91□□□□□ -1.14
PCNX1-205ENST00000553508 DAZAP1Q96EP5 407 aaKnown RBP7.91□□□□□ -1.14
PCNX1-205ENST00000553508 CIPCQ9C0C6 399 aa7.91□□□□□ -1.14
PCNX1-205ENST00000553508 BTBD1Q9H0C5 482 aa7.91□□□□□ -1.14
PCNX1-205ENST00000553508 TISP43B9A030 160 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 AGPSO00116 658 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 TJP3O95049 919 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 CYP2D6P10635 497 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 YY1P25490 414 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 IL1R2P27930 398 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 NTSR1P30989 418 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 PIK3CBP42338 1070 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 GATMP50440 423 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 SUMO2P61956 95 aaKnown RBP7.9□□□□□ -1.14
PCNX1-205ENST00000553508 PSG6Q00889 435 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 RNASE12Q5GAN4 147 aaKnown RBP7.9□□□□□ -1.14
PCNX1-205ENST00000553508 RRAGBQ5VZM2 374 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 ZKSCAN2Q63HK3 967 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 PLAG1Q6DJT9 500 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 SRRM1Q8IYB3 904 aaKnown RBP7.9□□□□□ -1.14
PCNX1-205ENST00000553508 C11orf44Q8N8P7 122 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 IPCEF1Q8WWN9 437 aaPredicted RBP7.9□□□□□ -1.14
PCNX1-205ENST00000553508 MSLNLQ96KJ4 702 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 STRBPQ96SI9 672 aaKnown RBP7.9□□□□□ -1.14
PCNX1-205ENST00000553508 VN1R3Q9BXE9 311 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 DHX36Q9H2U1 1008 aaKnown RBP7.9□□□□□ -1.14
PCNX1-205ENST00000553508 AS3MTQ9HBK9 375 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 DDX21Q9NR30 783 aaKnown RBP eCLIP7.9□□□□□ -1.14
PCNX1-205ENST00000553508 AMFRQ9UKV5 643 aa7.9□□□□□ -1.14
PCNX1-205ENST00000553508 CGB1A6NKQ9 187 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 MPGP29372 298 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 TIRAPP58753 221 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 TUBA4AP68366 448 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 SLC10A2Q12908 348 aaPredicted RBP7.89□□□□□ -1.15
PCNX1-205ENST00000553508 FOXF2Q12947 444 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 KIRREL2Q6UWL6 708 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 SERPINA13PQ6UXR4 307 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 RNF44Q7L0R7 432 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 CHSY1Q86X52 802 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 RAB11FIP4Q86YS3 637 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 LIX1LQ8IVB5 337 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 RSPRY1Q96DX4 576 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 SH2D3AQ9BRG2 576 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 THAP7Q9BT49 309 aaPredicted RBP7.89□□□□□ -1.15
PCNX1-205ENST00000553508 INO80BQ9C086 356 aaPredicted RBP7.89□□□□□ -1.15
PCNX1-205ENST00000553508 PNPLA8Q9NP80 782 aa7.89□□□□□ -1.15
PCNX1-205ENST00000553508 AQP7P3A6NL99 342 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 EXOC5O00471 708 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 KPNA5O15131 536 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 FGAP02671 866 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 RPL17P18621 184 aaKnown RBP7.88□□□□□ -1.15
PCNX1-205ENST00000553508 RENBPP51606 427 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 MTHFD1LQ6UB35 978 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 C8orf48Q96LL4 319 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 MMS19Q96T76 1030 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 BRIP1Q9BX63 1249 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 UNKQ9C0B0 810 aaKnown RBP7.88□□□□□ -1.15
PCNX1-205ENST00000553508 TFCP2L1Q9NZI6 479 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 DKK4Q9UBT3 224 aa7.88□□□□□ -1.15
PCNX1-205ENST00000553508 PRRT4C9JH25 899 aa7.87□□□□□ -1.15
PCNX1-205ENST00000553508 INMTO95050 263 aa7.87□□□□□ -1.15
PCNX1-205ENST00000553508 ANXA2P07355 339 aaKnown RBP7.87□□□□□ -1.15
PCNX1-205ENST00000553508 PARP1P09874 1014 aaKnown RBP7.87□□□□□ -1.15
PCNX1-205ENST00000553508 MYCLP12524 364 aaPredicted RBP7.87□□□□□ -1.15
PCNX1-205ENST00000553508 CREB1P16220 341 aa7.87□□□□□ -1.15
PCNX1-205ENST00000553508 HTRA4P83105 476 aaPredicted RBP7.87□□□□□ -1.15
PCNX1-205ENST00000553508 TIAL1Q01085 375 aaKnown RBP eCLIP7.87□□□□□ -1.15
PCNX1-205ENST00000553508 DAG1Q14118 895 aa7.87□□□□□ -1.15
PCNX1-205ENST00000553508 SRSF7Q16629 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
PCNX1-205ENST00000553508 KLHDC7AQ5VTJ3 777 aa7.87□□□□□ -1.15
PCNX1-205ENST00000553508 KRT78Q8N1N4 520 aa7.87□□□□□ -1.15
PCNX1-205ENST00000553508 HIST1H2AAQ96QV6 131 aa7.87□□□□□ -1.15
PCNX1-205ENST00000553508 IL18RAPO95256 599 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 COPB1P53618 953 aaKnown RBP7.86□□□□□ -1.15
PCNX1-205ENST00000553508 CLEC9AQ6UXN8 241 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 ZNF66Q6ZN08 573 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 PTCHD4Q6ZW05 846 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 SDR16C5Q8N3Y7 309 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 CCDC33Q8N5R6 958 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 VGLL2Q8N8G2 317 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 IQCDQ96DY2 449 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 SNX18Q96RF0 628 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 MGAT4CQ9UBM8 478 aa7.86□□□□□ -1.15
PCNX1-205ENST00000553508 POM121BA6NF01 834 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 APAF1O14727 1248 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 SPRY2O43597 315 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 CELA2AP08217 269 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 LMAN2Q12907 356 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 CEP78Q5JTW2 689 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 METTL25Q8N6Q8 603 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 LRRC46Q96FV0 321 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 RITA1Q96K30 269 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 ASB2Q96Q27 587 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 TBCBQ99426 244 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 FAM83DQ9H4H8 585 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 RIMKLBQ9ULI2 386 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 HPSEQ9Y251 543 aa7.85□□□□□ -1.15
PCNX1-205ENST00000553508 MYO15BQ96JP2 1530 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 KIF3BO15066 747 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms