RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 LRRC10BA6NIK2 292 aa19.47■□□□□ 0.71
CPSF2-202ENST00000553427 TPM2P07951 284 aa19.47■□□□□ 0.71
CPSF2-202ENST00000553427 HDCP19113 662 aa19.47■□□□□ 0.71
CPSF2-202ENST00000553427 MLLT6P55198 1093 aaPredicted RBP19.47■□□□□ 0.71
CPSF2-202ENST00000553427 STARD6P59095 220 aa19.47■□□□□ 0.71
CPSF2-202ENST00000553427 IFRD2Q12894 506 aaPredicted RBP19.47■□□□□ 0.71
CPSF2-202ENST00000553427 MLF2Q15773 248 aaPredicted RBP19.47■□□□□ 0.71
CPSF2-202ENST00000553427 PIGZQ86VD9 579 aa19.47■□□□□ 0.71
CPSF2-202ENST00000553427 SUGP1Q8IWZ8 645 aaKnown RBP19.47■□□□□ 0.71
CPSF2-202ENST00000553427 ARL14EPQ8N8R7 260 aaPredicted RBP19.47■□□□□ 0.71
CPSF2-202ENST00000553427 ANKRD20A12PQ8NF67 263 aa19.47■□□□□ 0.71
CPSF2-202ENST00000553427 DDX23Q9BUQ8 820 aaKnown RBP19.47■□□□□ 0.71
CPSF2-202ENST00000553427 TLR8Q9NR97 1041 aaKnown RBP19.47■□□□□ 0.71
CPSF2-202ENST00000553427 THG1LQ9NWX6 298 aaKnown RBP19.47■□□□□ 0.71
CPSF2-202ENST00000553427 CA14Q9ULX7 337 aa19.47■□□□□ 0.71
CPSF2-202ENST00000553427 PDGFBP01127 241 aaPredicted RBP19.46■□□□□ 0.71
CPSF2-202ENST00000553427 KRT5P13647 590 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 GLULP15104 373 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 PLA2G4AP47712 749 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 PSEN1P49768 467 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 CLCN5P51795 746 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 PDE4CQ08493 712 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 KCNMA1Q12791 1236 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 ZNF77Q15935 545 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 SLC44A4Q53GD3 710 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 HECTD3Q5T447 861 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 CWF19L1Q69YN2 538 aaKnown RBP19.46■□□□□ 0.71
CPSF2-202ENST00000553427 GJB7Q6PEY0 223 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 AOPEPQ8N6M6 819 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 MSANTD3Q96H12 275 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 CYP2S1Q96SQ9 504 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 ZSWIM1Q9BR11 485 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 MFSD1Q9H3U5 465 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 PLCB1Q9NQ66 1216 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 ZNF318Q5VUA4 2279 aa19.46■□□□□ 0.71
CPSF2-202ENST00000553427 MYH10P35580 1976 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 LGALS16A8MUM7 142 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 BECN2A8MW95 431 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 PES1O00541 588 aaKnown RBP19.45■□□□□ 0.7
CPSF2-202ENST00000553427 CYP26A1O43174 497 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 BRD2P25440 801 aaKnown RBP19.45■□□□□ 0.7
CPSF2-202ENST00000553427 APBA1Q02410 837 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 ZNF276Q8N554 614 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 RIN3Q8TB24 985 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 KCTD13Q8WZ19 329 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 TBC1D17Q9HA65 648 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 CYLDQ9NQC7 956 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 DAAM1Q9Y4D1 1078 aa19.45■□□□□ 0.7
CPSF2-202ENST00000553427 SYCE3A1L190 88 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 SMTNL1A8MU46 457 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 ABL1P00519 1130 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 ZNF165P49910 485 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 COPB1P53618 953 aaKnown RBP19.44■□□□□ 0.7
CPSF2-202ENST00000553427 MTF1Q14872 753 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 PDGFRLQ15198 375 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 ARHGAP44Q17R89 818 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 FKBP15Q5T1M5 1219 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 KLHDC7AQ5VTJ3 777 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 PM20D1Q6GTS8 502 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 ASTLQ6HA08 431 aaPredicted RBP19.44■□□□□ 0.7
CPSF2-202ENST00000553427 KLHDC10Q6PID8 442 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 C1orf228Q6PIY5 440 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 APTXQ7Z2E3 356 aaKnown RBP19.44■□□□□ 0.7
CPSF2-202ENST00000553427 DDX42Q86XP3 938 aaKnown RBP eCLIP19.44■□□□□ 0.7
CPSF2-202ENST00000553427 GPIHBP1Q8IV16 184 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 DHX40Q8IX18 779 aaKnown RBP19.44■□□□□ 0.7
CPSF2-202ENST00000553427 SCML4Q8N228 414 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 SH3RF2Q8TEC5 729 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 SLC35F5Q8WV83 523 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 FAM83CQ9BQN1 747 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 NAA15Q9BXJ9 866 aaKnown RBP19.44■□□□□ 0.7
CPSF2-202ENST00000553427 RNF38Q9H0F5 515 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 VPS16Q9H269 839 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 CLIC5Q9NZA1 410 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 CHORDC1Q9UHD1 332 aaPredicted RBP19.44■□□□□ 0.7
CPSF2-202ENST00000553427 DNAJC12Q9UKB3 198 aa19.44■□□□□ 0.7
CPSF2-202ENST00000553427 AJAP1Q9UKB5 411 aaPredicted RBP19.44■□□□□ 0.7
CPSF2-202ENST00000553427 HELZP42694 1942 aaKnown RBP19.43■□□□□ 0.7
CPSF2-202ENST00000553427 M0QYV0 167 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 COCHO43405 550 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 MED7O43513 233 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 TLR5O60602 858 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 CAVIN2O95810 425 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 AOC1P19801 751 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 NUBP1P53384 320 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 IER5LQ5T953 404 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 ARHGAP18Q8N392 663 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 LSM14BQ9BX40 385 aaKnown RBP19.43■□□□□ 0.7
CPSF2-202ENST00000553427 CPQQ9Y646 472 aa19.43■□□□□ 0.7
CPSF2-202ENST00000553427 F5P12259 2224 aa19.42■□□□□ 0.7
CPSF2-202ENST00000553427 LEFTY2O00292 366 aa19.42■□□□□ 0.7
CPSF2-202ENST00000553427 TULP2O00295 520 aa19.42■□□□□ 0.7
CPSF2-202ENST00000553427 MAN2B1O00754 1011 aa19.42■□□□□ 0.7
CPSF2-202ENST00000553427 UCHL3P15374 230 aa19.42■□□□□ 0.7
CPSF2-202ENST00000553427 GNA15P30679 374 aa19.42■□□□□ 0.7
CPSF2-202ENST00000553427 RPL34P49207 117 aaKnown RBP19.42■□□□□ 0.7
CPSF2-202ENST00000553427 PGFP49763 221 aa19.42■□□□□ 0.7
CPSF2-202ENST00000553427 ZXDBP98169 803 aa19.42■□□□□ 0.7
CPSF2-202ENST00000553427 CC2D1AQ6P1N0 951 aaPredicted RBP19.42■□□□□ 0.7
CPSF2-202ENST00000553427 SCD5Q86SK9 330 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms