RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ALG13Q9NP73 1137 aaKnown RBP6.04□□□□□ -1.44
ATXN3-218ENST00000553309 KMT5AQ9NQR1 393 aa6.04□□□□□ -1.44
ATXN3-218ENST00000553309 LMBRD1Q9NUN5 540 aa6.04□□□□□ -1.44
ATXN3-218ENST00000553309 TERF2IPQ9NYB0 399 aa6.04□□□□□ -1.44
ATXN3-218ENST00000553309 TRIM17Q9Y577 477 aa6.04□□□□□ -1.44
ATXN3-218ENST00000553309 INSL6Q9Y581 213 aa6.04□□□□□ -1.44
ATXN3-218ENST00000553309 PCDHA1Q9Y5I3 950 aa6.04□□□□□ -1.44
ATXN3-218ENST00000553309 UNC80Q8N2C7 3258 aa6.04□□□□□ -1.44
ATXN3-218ENST00000553309 FLT4P35916 1363 aa6.04□□□□□ -1.44
ATXN3-218ENST00000553309 LAMB4A4D0S4 1761 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 RBBP6Q7Z6E9 1792 aaKnown RBP6.03□□□□□ -1.44
ATXN3-218ENST00000553309 ANKRD26Q9UPS8 1709 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 ERVV-2B6SEH9 535 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 E7ENX8 843 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 H3BUI4 141 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 ABLIM3O94929 683 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 TYRP14679 529 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 PTH2RP49190 550 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 ZNF135P52742 658 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-218ENST00000553309 SIM1P81133 766 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-218ENST00000553309 MC2RQ01718 297 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 TAP2Q03519 686 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 MICALCLQ6ZW33 695 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 GRAMD1CQ8IYS0 662 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 ADGRG5Q8IZF4 528 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 POC1BQ8TC44 478 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 SNX19Q92543 992 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 MAP3K14Q99558 947 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 GPR35Q9HC97 309 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 PNPOQ9NVS9 261 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 FOXJ2Q9P0K8 574 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 TLK1Q9UKI8 766 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 HTTP42858 3142 aa6.03□□□□□ -1.44
ATXN3-218ENST00000553309 NCAPD2Q15021 1401 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 F5H697 171 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 PPM1GO15355 546 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-218ENST00000553309 MATN4O95460 622 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 CHEK2O96017 543 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 RARBP10826 455 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 CYP19A1P11511 503 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-218ENST00000553309 NPR1P16066 1061 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 MCL1Q07820 350 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 HLXQ14774 488 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-218ENST00000553309 KIF22Q14807 665 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 TMPRSS9Q7Z410 1059 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 USP37Q86T82 979 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 PPP1R3BQ86XI6 285 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 ADGRG3Q86Y34 549 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 TOR1AIP2Q8NFQ8 470 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 ACTRT2Q8TDY3 377 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 LPIN2Q92539 896 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 HPS3Q969F9 1004 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 FBXL20Q96IG2 436 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 PDLIM2Q96JY6 352 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 FAM167AQ96KS9 214 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 NAP1L5Q96NT1 182 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-218ENST00000553309 DUSP26Q9BV47 211 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 PRO3102Q9H379 93 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 KIAA1586Q9HCI6 787 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 PGAP2Q9UHJ9 254 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 FEZ2Q9UHY8 353 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-218ENST00000553309 ZDHHC8Q9ULC8 765 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 AGAP1Q9UPQ3 857 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 STXBP5LQ9Y2K9 1186 aa6.02□□□□□ -1.45
ATXN3-218ENST00000553309 TTC28Q96AY4 2481 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 TCERG1O14776 1098 aaKnown RBP6.01□□□□□ -1.45
ATXN3-218ENST00000553309 VPS4BO75351 444 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 AHSGP02765 367 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 DEKP35659 375 aaKnown RBP6.01□□□□□ -1.45
ATXN3-218ENST00000553309 RAB27AP51159 221 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 ATAT1Q5SQI0 421 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 IFIT1BQ5T764 474 aaKnown RBP6.01□□□□□ -1.45
ATXN3-218ENST00000553309 KAZNQ674X7 775 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 DPY19L2P1Q6NXN4 242 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 FBXO42Q6P3S6 717 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 ZNF530Q6P9A1 599 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-218ENST00000553309 JPH3Q8WXH2 748 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-218ENST00000553309 SIK2Q9H0K1 926 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 MRPS18AQ9NVS2 196 aaKnown RBP6.01□□□□□ -1.45
ATXN3-218ENST00000553309 ZNF180Q9UJW8 692 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 NR2E3Q9Y5X4 410 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 CACNA1AO00555 2505 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 NPC1L1Q9UHC9 1359 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 SCN7AQ01118 1682 aa6.01□□□□□ -1.45
ATXN3-218ENST00000553309 SNED1Q8TER0 1413 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 A0A0U1RQG5 324 aaPredicted RBP6□□□□□ -1.45
ATXN3-218ENST00000553309 MPPED1O15442 326 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 PPIP5K2O43314 1243 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 PROM1O43490 865 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 AKAP10O43572 662 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 AP1G1O43747 822 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 OFD1O75665 1012 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 KIF20AO95235 890 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 GNAI2P04899 355 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 ALDH2P05091 517 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 NPTX2P47972 431 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 NKX6-1P78426 367 aaPredicted RBP6□□□□□ -1.45
ATXN3-218ENST00000553309 CXCL9Q07325 125 aa6□□□□□ -1.45
ATXN3-218ENST00000553309 SLC39A6Q13433 755 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms