RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 TMEM92Q6UXU6 159 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 FAM35AQ86V20 835 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 ALLCQ8N6M5 410 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 TXNDC5Q8NBS9 432 aaKnown RBP12.18□□□□□ -0.46
NEK3-204ENST00000552973 MDGA1Q8NFP4 955 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 RLN3Q8WXF3 142 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 WBP2Q969T9 261 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 CHAMP1Q96JM3 812 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 CCSER2Q9H7U1 834 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 VPS45Q9NRW7 570 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 GMIPQ9P107 970 aa12.18□□□□□ -0.46
NEK3-204ENST00000552973 CGNQ9P2M7 1197 aaKnown RBP12.18□□□□□ -0.46
NEK3-204ENST00000552973 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
NEK3-204ENST00000552973 A0A1B0GVL5 298 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 SGK1O00141 431 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 SLC9A3R1O14745 358 aaPredicted RBP12.17□□□□□ -0.46
NEK3-204ENST00000552973 TM4SF5O14894 197 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 ACTN4O43707 911 aaKnown RBP12.17□□□□□ -0.46
NEK3-204ENST00000552973 AP1G2O75843 785 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 BEST1O76090 585 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 RTN3O95197 1032 aaPredicted RBP12.17□□□□□ -0.46
NEK3-204ENST00000552973 KAT7O95251 611 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 KLF8O95600 359 aaPredicted RBP12.17□□□□□ -0.46
NEK3-204ENST00000552973 APODP05090 189 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 SLFN14P0C7P3 912 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 IRF1P10914 325 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 ADH5P11766 374 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 PGFP49763 221 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 LIMK1P53667 647 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 CEP135Q66GS9 1140 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 FUKQ8N0W3 1084 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 FRMD1Q8N878 549 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 PDZD8Q8NEN9 1154 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 CCDC26Q8TAB7 109 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 GOLGA5Q8TBA6 731 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 TNIP3Q96KP6 325 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
NEK3-204ENST00000552973 DMAP1Q9NPF5 467 aaPredicted RBP12.17□□□□□ -0.46
NEK3-204ENST00000552973 ARHGEF4Q9NR80 690 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 KRT82Q9NSB4 513 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 EXOC1Q9NV70 894 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 DMAC2Q9NW81 257 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 HMGXB4Q9UGU5 601 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 RCOR1Q9UKL0 485 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 MMP17Q9ULZ9 603 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 SH3BP1Q9Y3L3 701 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 CEP250Q9BV73 2442 aa12.17□□□□□ -0.46
NEK3-204ENST00000552973 ATP8B3O60423 1300 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 BCLAF3A2AJT9 711 aaKnown RBP12.16□□□□□ -0.46
NEK3-204ENST00000552973 C4orf47A7E2U8 309 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 PATE3B3GLJ2 98 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 TNFRSF10BO14763 440 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 ADH1CP00326 375 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 NR3C1P04150 777 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 ADORA2BP29275 332 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 DHPSP49366 369 aaPredicted RBP12.16□□□□□ -0.46
NEK3-204ENST00000552973 NDST1P52848 882 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 AP3M2P53677 418 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 MAP3K7CLP57077 242 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 MRPS21P82921 87 aaKnown RBP12.16□□□□□ -0.46
NEK3-204ENST00000552973 GAD2Q05329 585 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 ANO4Q32M45 955 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 PMS2CLQ68D20 193 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 ARMCX6Q7L4S7 300 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 RASSF3Q86WH2 238 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 DDX42Q86XP3 938 aaKnown RBP eCLIP12.16□□□□□ -0.46
NEK3-204ENST00000552973 BBS7Q8IWZ6 715 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 C12orf29Q8N999 325 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 IL17RCQ8NAC3 791 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 ZMIZ2Q8NF64 920 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 SLC2A14Q8TDB8 520 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 DDX1Q92499 740 aaKnown RBP12.16□□□□□ -0.46
NEK3-204ENST00000552973 JAKMIP2Q96AA8 810 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 ERLEC1Q96DZ1 483 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 SMARCD1Q96GM5 515 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 CNOT6LQ96LI5 555 aaKnown RBP12.16□□□□□ -0.46
NEK3-204ENST00000552973 SMOQ99835 787 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 EDEM2Q9BV94 578 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 NACA2Q9H009 215 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 VRTNQ9H8Y1 702 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 FAM49BQ9NUQ9 324 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 TBC1D14Q9P2M4 693 aa12.16□□□□□ -0.46
NEK3-204ENST00000552973 E2F8A0AVK6 867 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 TBC1D3BA6NDS4 549 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 TRIM24O15164 1050 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 ALDH1A2O94788 518 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 TBX18O95935 607 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 PFKFB1P16118 471 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 GRIA2P42262 883 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 CLDN10P78369 228 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 SV2AQ7L0J3 742 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 TMEM25Q86YD3 366 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 SLC9A9Q8IVB4 645 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 PGBD3Q8N328 593 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 OVCA2Q8WZ82 227 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 PIGKQ92643 395 aa12.15□□□□□ -0.46
NEK3-204ENST00000552973 TWNKQ96RR1 684 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms