RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 KCNK3O14649 394 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 ABL1P00519 1130 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 NCAM1P13591 858 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 GUCY2CP25092 1073 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.06
VPS29-209ENST00000551655 SMTNP53814 917 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 CXADRP78310 365 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 TRMT11Q7Z4G4 463 aaKnown RBP15.45■□□□□ 0.06
VPS29-209ENST00000551655 SPATA2LQ8IUW3 424 aaPredicted RBP15.45■□□□□ 0.06
VPS29-209ENST00000551655 FMNL3Q8IVF7 1028 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 CHPFQ8IZ52 775 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 TERB1Q8NA31 727 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 DNASE2BQ8WZ79 361 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 FOXJ1Q92949 421 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 NXPE2Q96DL1 559 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 TOE1Q96GM8 510 aaKnown RBP15.45■□□□□ 0.06
VPS29-209ENST00000551655 TSPAN18Q96SJ8 248 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 KIF2CQ99661 725 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 ARID3AQ99856 593 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 KNL1Q8NG31 2342 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.44■□□□□ 0.06
VPS29-209ENST00000551655 A0A0B4J269 797 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 TEX51A0A1B0GUA7 166 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 ZNF840PA6NDX5 716 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 WASH3PC4AMC7 463 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 TNFSF14O43557 240 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 ATP2C2O75185 946 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 CD6P30203 668 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 NCKAP1LP55160 1127 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 KCNC4Q03721 635 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 ZRSR1Q15695 479 aaKnown RBP15.44■□□□□ 0.06
VPS29-209ENST00000551655 SV2CQ496J9 727 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 DCAF12L1Q5VU92 463 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 CD302Q8IX05 232 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 C4orf32Q8N8J7 132 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 ACBD6Q9BR61 282 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 TRPM5Q9NZQ8 1165 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 DEC1Q9P2X7 70 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 DERAQ9Y315 318 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 AK5Q9Y6K8 562 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 CABIN1Q9Y6J0 2220 aa15.44■□□□□ 0.06
VPS29-209ENST00000551655 MYLKQ15746 1914 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 KCNJ18B7U540 433 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 CBX4O00257 560 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 TULP1O00294 542 aaPredicted RBP15.43■□□□□ 0.06
VPS29-209ENST00000551655 SLC9A3R1O14745 358 aaPredicted RBP15.43■□□□□ 0.06
VPS29-209ENST00000551655 TRIM66O15016 1216 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 BCAT2O15382 392 aaPredicted RBP15.43■□□□□ 0.06
VPS29-209ENST00000551655 RRP8O43159 456 aaKnown RBP15.43■□□□□ 0.06
VPS29-209ENST00000551655 OLFM2O95897 454 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 CSNK1EP49674 416 aaKnown RBP15.43■□□□□ 0.06
VPS29-209ENST00000551655 PDE6CP51160 858 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 WNT7BP56706 349 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 GAD2Q05329 585 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 KYAT1Q16773 422 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 CFAP221Q4G0U5 840 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 TAF1BQ53T94 588 aaPredicted RBP15.43■□□□□ 0.06
VPS29-209ENST00000551655 TTC38Q5R3I4 469 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 LAYNQ6UX15 382 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 TMEM25Q86YD3 366 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 WBP2Q969T9 261 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 PLIN2Q99541 437 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
VPS29-209ENST00000551655 TM6SF1Q9BZW5 370 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 IKZF4Q9H2S9 585 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 EIF2B4Q9UI10 523 aaKnown RBP15.43■□□□□ 0.06
VPS29-209ENST00000551655 PCDHGB2Q9Y5G2 931 aa15.43■□□□□ 0.06
VPS29-209ENST00000551655 PRRT4C9JH25 899 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 ANKRD63C9JTQ0 380 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 ZBTB24O43167 697 aaPredicted RBP15.42■□□□□ 0.06
VPS29-209ENST00000551655 OAS1P00973 400 aaKnown RBP15.42■□□□□ 0.06
VPS29-209ENST00000551655 MBL2P11226 248 aaPredicted RBP15.42■□□□□ 0.06
VPS29-209ENST00000551655 PSMC1P62191 440 aaKnown RBP15.42■□□□□ 0.06
VPS29-209ENST00000551655 IL9RQ01113 521 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 SRSF1Q07955 248 aaKnown RBP eCLIP15.42■□□□□ 0.06
VPS29-209ENST00000551655 CCDC173Q0VFZ6 552 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 TRIM29Q14134 588 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 LY6DQ14210 128 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 KIF19Q2TAC6 998 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 ANO4Q32M45 955 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 BTBD8Q5XKL5 378 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 BBS7Q8IWZ6 715 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 NSUN7Q8NE18 718 aaKnown RBP15.42■□□□□ 0.06
VPS29-209ENST00000551655 KCNV2Q8TDN2 545 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 GABRG3Q99928 467 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 WSB2Q9NYS7 404 aaPredicted RBP15.42■□□□□ 0.06
VPS29-209ENST00000551655 C2CD2Q9Y426 696 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 SNX11Q9Y5W9 270 aa15.42■□□□□ 0.06
VPS29-209ENST00000551655 E9PAM4 449 aa15.41■□□□□ 0.06
VPS29-209ENST00000551655 HOXC11O43248 304 aaPredicted RBP15.41■□□□□ 0.06
VPS29-209ENST00000551655 PIGRP01833 764 aa15.41■□□□□ 0.06
VPS29-209ENST00000551655 BDNFP23560 247 aa15.41■□□□□ 0.06
VPS29-209ENST00000551655 POLR2BP30876 1174 aaKnown RBP15.41■□□□□ 0.06
VPS29-209ENST00000551655 GRIK1P39086 918 aa15.41■□□□□ 0.06
VPS29-209ENST00000551655 MYL7Q01449 175 aa15.41■□□□□ 0.06
VPS29-209ENST00000551655 TLE3Q04726 772 aa15.41■□□□□ 0.06
VPS29-209ENST00000551655 IL17AQ16552 155 aa15.41■□□□□ 0.06
VPS29-209ENST00000551655 C6orf118Q5T5N4 469 aa15.41■□□□□ 0.06
VPS29-209ENST00000551655 DENND5BQ6ZUT9 1274 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms