RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SYDE1Q6ZW31 735 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ARMCX2Q7L311 632 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 OVCH2Q7RTZ1 564 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 DAAM2Q86T65 1068 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 RSPH3Q86UC2 560 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 SESTD1Q86VW0 696 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 REXO1L1PQ8IX06 675 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 TMEFF1Q8IYR6 380 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 GMCL1P1Q8NEA9 526 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 NUDT10Q8NFP7 164 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 TET1Q8NFU7 2136 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 SVIPQ8NHG7 77 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 PPP1R35Q8TAP8 253 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ZCCHC14Q8WYQ9 949 aaKnown RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 GCDHQ92947 438 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 KAT5Q92993 513 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 NKD2Q969F2 451 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 CYFIP2Q96F07 1278 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 NUDT11Q96G61 164 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 AJUBAQ96IF1 538 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 CDK5RAP3Q96JB5 506 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 FAM84AQ96KN4 292 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 TNIP3Q96KP6 325 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 CCDC17Q96LX7 622 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 PWWP2AQ96N64 755 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 NEUROD6Q96NK8 337 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 SLC38A3Q99624 504 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 CGRRF1Q99675 332 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 TRPV6Q9H1D0 765 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ALDH8A1Q9H2A2 487 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 TMEM60Q9H2L4 133 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 A1CFQ9NQ94 594 aaKnown RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 DMRT3Q9NQL9 472 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ATP8A2Q9NTI2 1148 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 SMC4Q9NTJ3 1288 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 TDP1Q9NUW8 608 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 SPATA6Q9NWH7 488 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 MTMR4Q9NYA4 1195 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 RAI14Q9P0K7 980 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ZDHHC9Q9Y397 364 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 COMMD10Q9Y6G5 202 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 PARP14Q460N5 1801 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 FOCADQ5VW36 1801 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 CHD8Q9HCK8 2581 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 MYO7AQ13402 2215 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 MYH13Q9UKX3 1938 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 MYO9BQ13459 2157 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 EP300Q09472 2414 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 CDK5RAP2Q96SN8 1893 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 CAPN8A6NHC0 703 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 PQBP1O60828 265 aaKnown RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 TMEM127O75204 238 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 SURF6O75683 361 aaKnown RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 ALDH1A2O94788 518 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 KLHL18O94889 574 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 HRGP04196 525 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 ALDH2P05091 517 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 IQCF3P0C7M6 154 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 MED14OSP0DP75 135 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 RARBP10826 455 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 FCER1AP12319 257 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 RHCEP18577 417 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 HTR1BP28222 390 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 KIR2DL3P43628 341 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 SARSP49591 514 aaKnown RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 MRE11P49959 708 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 RRADP55042 308 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 WNT3AP56704 352 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 HTRA4P83105 476 aaPredicted RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 CDC42EP1Q00587 391 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 BEX3Q00994 111 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 RHDQ02161 417 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 ITGA7Q13683 1181 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 KCNC3Q14003 757 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 USP10Q14694 798 aaKnown RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 ZNF568Q3ZCX4 644 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 DUSP28Q4G0W2 176 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 FAM83BQ5T0W9 1011 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 SLC9C2Q5TAH2 1124 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 RNF220Q5VTB9 566 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 TRIM68Q6AZZ1 485 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 MCTP2Q6DN12 878 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 CXCL17Q6UXB2 119 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 NPNTQ6UXI9 565 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 ATG14Q6ZNE5 492 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 Q6ZUG5 572 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 USP30Q70CQ3 517 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 PDZD4Q76G19 769 aaPredicted RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 DPP9Q86TI2 863 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 CERS3Q8IU89 383 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 RPAP2Q8IXW5 612 aaPredicted RBP2.75□□□□□ -1.97
CPSF6-207ENST00000551516 FAM9BQ8IZU0 186 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 PQLC1Q8N2U9 271 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 C3orf20Q8ND61 904 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 FAM156AQ8NDB6 213 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 PIK3C3Q8NEB9 887 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 PHOSPHO2Q8TCD6 241 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 CCHCR1Q8TD31 782 aa2.75□□□□□ -1.97
CPSF6-207ENST00000551516 ZNF480Q8WV37 535 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms