RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 FAM163BP0C2L3 166 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 YWHAQP27348 245 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 KIR2DL1P43626 348 aaPredicted RBP19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 AFMP43652 599 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 PPP3CCP48454 512 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 IRX4P78413 519 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 AMPD3Q01432 767 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 ORC1Q13415 861 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 TRPC3Q13507 836 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 CUL4BQ13620 913 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 LY6G5CQ5SRR4 150 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 NUP93Q8N1F7 819 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 NAT16Q8N8M0 369 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 OLIG1Q8TAK6 271 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 FBXO32Q969P5 355 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 PNKPQ96T60 521 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 BACH2Q9BYV9 841 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 ELOVL4Q9GZR5 314 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 CCSER2Q9H7U1 834 aa19.02■□□□□ 0.64
PRPF40B-215ENST00000551418 FRYQ5TBA9 3013 aa19.02■□□□□ 0.63
PRPF40B-215ENST00000551418 K7ELQ4 463 aaPredicted RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 CDX4O14627 284 aaPredicted RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 TNFRSF10BO14763 440 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 TRIM24O15164 1050 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 ADAM23O75077 832 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 VNN1O95497 513 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 STAU1O95793 577 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 ADH5P11766 374 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 DHPSP49366 369 aaPredicted RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 MRPS21P82921 87 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 SCARA5Q6ZMJ2 495 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 FAM35AQ86V20 835 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 PHTF2Q8N3S3 785 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 ZNF396Q96N95 335 aaPredicted RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 SLITRK1Q96PX8 696 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 ARHGEF4Q9NR80 690 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 EHD2Q9NZN4 543 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 MBD1Q9UIS9 605 aaPredicted RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 HCN2Q9UL51 889 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 TNRC6BQ9UPQ9 1833 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 ASCC3Q8N3C0 2202 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 MYH10P35580 1976 aa19.01■□□□□ 0.63
PRPF40B-215ENST00000551418 PI4KAP42356 2102 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 CEP295Q9C0D2 2601 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 A0A0A0MRY4 1105 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 LRRIQ3A6PVS8 624 aaPredicted RBP19■□□□□ 0.63
PRPF40B-215ENST00000551418 SLC9A3R1O14745 358 aaPredicted RBP19■□□□□ 0.63
PRPF40B-215ENST00000551418 PHACTR2O75167 634 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 BEST1O76090 585 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 YEATS4O95619 227 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 TOP3BO95985 862 aaKnown RBP19■□□□□ 0.63
PRPF40B-215ENST00000551418 C4BPAP04003 597 aaKnown RBP19■□□□□ 0.63
PRPF40B-215ENST00000551418 NOVA1P51513 510 aaKnown RBP19■□□□□ 0.63
PRPF40B-215ENST00000551418 DLG4P78352 724 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 SHC2P98077 582 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 BMT2Q1RMZ1 405 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 ARMCX6Q7L4S7 300 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 ACOT1Q86TX2 421 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 ZMIZ2Q8NF64 920 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 PIGKQ92643 395 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 TMEM74BQ9NUR3 256 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 IL37Q9NZH6 218 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 GMIPQ9P107 970 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 CIZ1Q9ULV3 898 aaPredicted RBP19■□□□□ 0.63
PRPF40B-215ENST00000551418 PCDHA7Q9UN72 937 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 UBE4BO95155 1302 aa19■□□□□ 0.63
PRPF40B-215ENST00000551418 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 KLRC4O43908 158 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 EXOC3O60645 756 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 APODP05090 189 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 ATICP31939 592 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 P2RY2P41231 377 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 PTGER3P43115 390 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 BIRC3Q13489 604 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 KNOP1Q1ED39 458 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 CYP2U1Q7Z449 544 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 TMEM25Q86YD3 366 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 BBS7Q8IWZ6 715 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 C12orf56Q8IXR9 622 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 TMEFF1Q8IYR6 380 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 FUKQ8N0W3 1084 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 CCDC26Q8TAB7 109 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 PARD3BQ8TEW8 1205 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 HMGB4Q8WW32 186 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 ERLEC1Q96DZ1 483 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 SMOQ99835 787 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 MED10Q9BTT4 135 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 HMGXB4Q9UGU5 601 aa18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 RALYQ9UKM9 306 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-215ENST00000551418 CFAP47Q6ZTR5 3102 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 CEP192Q8TEP8 1941 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 ADAMTS9Q9P2N4 1935 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 E2F8A0AVK6 867 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 KHNYNO15037 678 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 RTN3O95197 1032 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 ADH1CP00326 375 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 IRF1P10914 325 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 CCDC130P13994 396 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 SPINK2P20155 84 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms