RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ELOA2Q8IYF1 753 aaPredicted RBP13.81□□□□□ -0.2
NPAS3-209ENST00000551008 DCLK2Q8N568 766 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 TATDN2Q93075 761 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 SMARCE1Q969G3 411 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 FBXO32Q969P5 355 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 HNRNPABQ99729 332 aaKnown RBP13.81□□□□□ -0.2
NPAS3-209ENST00000551008 MED10Q9BTT4 135 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 CYP3A43Q9HB55 503 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 RMND1Q9NWS8 449 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 OSER1Q9NX31 292 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 DUS2Q9NX74 493 aaKnown RBP13.81□□□□□ -0.2
NPAS3-209ENST00000551008 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 COQ4Q9Y3A0 265 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 CPQQ9Y646 472 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 CACNA1AO00555 2505 aa13.81□□□□□ -0.2
NPAS3-209ENST00000551008 GOLGA6L4A6NEF3 574 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 PPP1R3GB7ZBB8 358 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 CETN3O15182 167 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 CLSTN1O94985 981 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 RTN3O95197 1032 aaPredicted RBP13.8□□□□□ -0.2
NPAS3-209ENST00000551008 CD58P19256 250 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 ADORA2BP29275 332 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 OPRD1P41143 372 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 PPP3CCP48454 512 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 MAP3K7CLP57077 242 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 ZC3H14Q6PJT7 736 aaKnown RBP13.8□□□□□ -0.2
NPAS3-209ENST00000551008 UBR7Q8N806 425 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 TTC16Q8NEE8 873 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 OVCA2Q8WZ82 227 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 SLC35C1Q96A29 364 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 SLITRK1Q96PX8 696 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 EPC1Q9H2F5 836 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 CCSER2Q9H7U1 834 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 RAB20Q9NX57 234 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 CHORDC1Q9UHD1 332 aaPredicted RBP13.8□□□□□ -0.2
NPAS3-209ENST00000551008 ATP8B3O60423 1300 aa13.8□□□□□ -0.2
NPAS3-209ENST00000551008 SLC16A3O15427 465 aaKnown RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 GREM1O60565 184 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 KINO60870 393 aaKnown RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 SMC2O95347 1197 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 CYP17A1P05093 508 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 EPB41P11171 864 aaKnown RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 CXCL12P48061 93 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 IFNAR2P48551 515 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 GALK1P51570 392 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 RAD23BP54727 409 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 FKBP3Q00688 224 aaKnown RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 LRRC63Q05C16 580 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 SRSF5Q13243 272 aaKnown RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 MORC3Q14149 939 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 PPP1R26Q5T8A7 1209 aaPredicted RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 SFTPA1Q8IWL2 248 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 CPA6Q8N4T0 437 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 SLC4A11Q8NBS3 891 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 FBXL13Q8NEE6 735 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 CYFIP2Q96F07 1278 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 NT5C1AQ9BXI3 368 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 NMUR1Q9HB89 426 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 CFAP97Q9P2B7 532 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 SMG5Q9UPR3 1016 aaKnown RBP13.79□□□□□ -0.2
NPAS3-209ENST00000551008 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
NPAS3-209ENST00000551008 CHURC1-FNTBB4DL54 471 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 CYP26A1O43174 497 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 ABL1P00519 1130 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 FAM200BP0CF97 657 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 FNTBP49356 437 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 ZNF394Q53GI3 561 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 DCAF17Q5H9S7 520 aaPredicted RBP13.78□□□□□ -0.2
NPAS3-209ENST00000551008 C12orf40Q86WS4 652 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 SYNPOQ8N3V7 929 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 PDZD8Q8NEN9 1154 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 MED15Q96RN5 788 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 P2RY13Q9BPV8 354 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 FAM126AQ9BYI3 521 aaPredicted RBP13.78□□□□□ -0.2
NPAS3-209ENST00000551008 IMPG2Q9BZV3 1241 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 CISHQ9NSE2 258 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 COMMD8Q9NX08 183 aa13.78□□□□□ -0.2
NPAS3-209ENST00000551008 BIN1O00499 593 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 HRO43593 1189 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 RNF40O75150 1001 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 TBX18O95935 607 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 MBL2P11226 248 aaPredicted RBP13.77□□□□□ -0.21
NPAS3-209ENST00000551008 TGM1P22735 817 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 HOXA6P31267 233 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 TUBP50607 506 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 PDE6CP51160 858 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 HECTD3Q5T447 861 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 RHBDF2Q6PJF5 856 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 SCD5Q86SK9 330 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 ADGRG2Q8IZP9 1017 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 KIAA1958Q8N8K9 716 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 LMO3Q8TAP4 145 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 ATRIPQ8WXE1 791 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms