RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SBNO1A3KN83 1393 aa6.13□□□□□ -1.43
CPSF6-206ENST00000550987 SPTBN4Q9H254 2564 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 POLRMTO00411 1230 aaKnown RBP6.12□□□□□ -1.43
CPSF6-206ENST00000550987 COQ9O75208 318 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 METP08581 1390 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 CR2P20023 1033 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 SLC6A2P23975 617 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 CPT1AP50416 773 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 POLE2P56282 527 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 KRT17Q04695 432 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 DDX10Q13206 875 aaKnown RBP6.12□□□□□ -1.43
CPSF6-206ENST00000550987 IQCB1Q15051 598 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 VMACQ2NL98 169 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 CCDC88AQ3V6T2 1871 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 ARHGAP15Q53QZ3 475 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 JMJD6Q6NYC1 403 aaPredicted RBP6.12□□□□□ -1.43
CPSF6-206ENST00000550987 KLHL17Q6TDP4 642 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 CRTC1Q6UUV9 634 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 SLC30A10Q6XR72 485 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 ZNF761Q86XN6 746 aaPredicted RBP6.12□□□□□ -1.43
CPSF6-206ENST00000550987 PDPRQ8NCN5 879 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 PPHLN1Q8NEY8 458 aaKnown RBP6.12□□□□□ -1.43
CPSF6-206ENST00000550987 MBD6Q96DN6 1003 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 NEIL1Q96FI4 390 aaPredicted RBP6.12□□□□□ -1.43
CPSF6-206ENST00000550987 KLHL32Q96NJ5 620 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 DPYSL5Q9BPU6 564 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 CPEB1Q9BZB8 566 aaKnown RBP6.12□□□□□ -1.43
CPSF6-206ENST00000550987 TTYH3Q9C0H2 523 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 PCDHAC1Q9H158 963 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 IGSF9Q9P2J2 1179 aa6.12□□□□□ -1.43
CPSF6-206ENST00000550987 ZMYND8Q9ULU4 1186 aaPredicted RBP6.12□□□□□ -1.43
CPSF6-206ENST00000550987 ALS2Q96Q42 1657 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 YTHDC2Q9H6S0 1430 aaKnown RBP6.11□□□□□ -1.43
CPSF6-206ENST00000550987 A0A0G2JLW4 131 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 H7C4K7 107 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 NCAM2O15394 837 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 RGS10O43665 173 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 RASAL1O95294 804 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 TNFRSF6BO95407 300 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 CENPBP07199 599 aaPredicted RBP6.11□□□□□ -1.43
CPSF6-206ENST00000550987 ITGA2BP08514 1039 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 CKBP12277 381 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 MGAT1P26572 445 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 GABRB3P28472 473 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 WNT3P56703 355 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 PIGFQ07326 219 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 ZNF844Q08AG5 666 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 GRM7Q14831 915 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 MAPKAPK3Q16644 382 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 ADCK5Q3MIX3 580 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 MGAT5BQ3V5L5 792 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 CACHD1Q5VU97 1274 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 PLAG1Q6DJT9 500 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 SULT6B1Q6IMI4 303 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 USP17L6PQ6QN14 398 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 ARHGEF18Q6ZSZ5 1173 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 DOK3Q7L591 496 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 MAATS1Q7Z4T9 603 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 MAFAQ8NHW3 353 aaPredicted RBP6.11□□□□□ -1.43
CPSF6-206ENST00000550987 CFHR4Q92496 578 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 USP13Q92995 863 aaPredicted RBP6.11□□□□□ -1.43
CPSF6-206ENST00000550987 FAM84AQ96KN4 292 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 SLC46A1Q96NT5 459 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 LRRC37BQ96QE4 947 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 LMF1Q96S06 567 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 SLC38A3Q99624 504 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 SENP7Q9BQF6 1050 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 AGO3Q9H9G7 860 aaKnown RBP6.11□□□□□ -1.43
CPSF6-206ENST00000550987 KIF17Q9P2E2 1029 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 FBXO9Q9UK97 447 aaPredicted RBP6.11□□□□□ -1.43
CPSF6-206ENST00000550987 SHOC2Q9UQ13 582 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 CDYLQ9Y232 598 aa6.11□□□□□ -1.43
CPSF6-206ENST00000550987 CDH23Q9H251 3354 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 HMX3A6NHT5 357 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 CYSRT1A8MQ03 144 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 IPO5O00410 1097 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 USP1O94782 785 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 CNOT4O95628 575 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 ATICP31939 592 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 VIPR2P41587 438 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 PTDSS1P48651 473 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 G3BP1Q13283 466 aaKnown RBP eCLIP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 FAXCQ5TGI0 409 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 FBXO46Q6PJ61 603 aaPredicted RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 CLEC4GQ6UXB4 293 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 PLEKHH3Q7Z736 793 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 TMEM151BQ8IW70 566 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 LINC01356Q8N9X3 169 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 NAXEQ8NCW5 288 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 DNERQ8NFT8 737 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 NUP133Q8WUM0 1156 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 ST8SIA2Q92186 375 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 DACT3Q96B18 629 aaPredicted RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 SKA1Q96BD8 255 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 GDF15Q99988 308 aa6.1□□□□□ -1.43
CPSF6-206ENST00000550987 DHX36Q9H2U1 1008 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 MAP3K20Q9NYL2 800 aaKnown RBP6.1□□□□□ -1.43
CPSF6-206ENST00000550987 HESX1Q9UBX0 185 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms