RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 SEMA4AQ9H3S1 761 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 FZD8Q9H461 694 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 CCDC134Q9H6E4 229 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 RRAGCQ9HB90 399 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ACP6Q9NPH0 428 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 ASNSD1Q9NWL6 643 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 BTBD7Q9P203 1132 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 NUB1Q9Y5A7 615 aa4.58□□□□□ -1.68
CCDC59-204ENST00000550589 COL1A2P08123 1366 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 XPOTO43592 962 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ZNF189O75820 626 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 TOMM70O94826 608 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 MAP3K6O95382 1288 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 CST3P01034 146 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 GH1P01241 217 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 KRT1P04264 644 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ITGAVP06756 1048 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ABHD2P08910 425 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 CHN1P15882 459 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 CD58P19256 250 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 FGFR4P22455 802 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 PSMA2P25787 234 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 MARK3P27448 753 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 KCNJ1P48048 391 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ITGA8P53708 1063 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 GSCP56915 257 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 IL9RQ01113 521 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 KLF1Q13351 362 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 SNX1Q13596 522 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 TFDP2Q14188 446 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ITIH4Q14624 930 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 SIX1Q15475 284 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 SEPT7Q16181 437 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 WDR72Q3MJ13 1102 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 HSDL1Q3SXM5 330 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 EAPPQ56P03 285 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 SPOPLQ6IQ16 392 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 AADACL2Q6P093 401 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 TTC27Q6P3X3 843 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 C4orf22Q6V702 233 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ILDR2Q71H61 639 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 EEPD1Q7L9B9 569 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ATCAYQ86WG3 371 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ZDHHC17Q8IUH5 632 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 PASD1Q8IV76 773 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 OR5B17Q8NGF7 314 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 RSAD2Q8WXG1 361 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ARHGEF2Q92974 986 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 MCEEQ96PE7 176 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 TSPAN18Q96SJ8 248 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 FERMT1Q9BQL6 677 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 FRMD8Q9BZ67 464 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 MTMR12Q9C0I1 747 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 CDC42EP4Q9H3Q1 356 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 RSAD1Q9HA92 442 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 APOBEC3GQ9HC16 384 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 VTA1Q9NP79 307 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 C11orf16Q9NQ32 467 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 DNAJB12Q9NXW2 375 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 CHORDC1Q9UHD1 332 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ITGA11Q9UKX5 1188 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 TPX2Q9ULW0 747 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 AKT3Q9Y243 479 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 NEU2Q9Y3R4 380 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 C2CD2Q9Y426 696 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 LRRD1A4D1F6 860 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 C5orf60A6NFR6 353 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 RRN3P2A6NIE6 340 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 SGK1O00141 431 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 MCF2LO15068 1137 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 SUN1O94901 812 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ACSL3O95573 720 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 CPP00450 1065 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 VIMP08670 466 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 VDRP11473 427 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 PROZP22891 400 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 STX2P32856 288 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 GCLCP48506 637 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 SEC24CP53992 1094 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 YARSP54577 528 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 SLC8A3P57103 927 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 MYL6P60660 151 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 PSMC1P62191 440 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 RBP5P82980 135 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 PLAURQ03405 335 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 IFT88Q13099 833 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 R3HDM1Q15032 1099 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 CNGA2Q16280 664 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ZNF394Q53GI3 561 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 FAM47CQ5HY64 1035 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 IZUMO3Q5VZ72 239 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 KAZNQ674X7 775 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ANKS1BQ7Z6G8 1248 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ZNF410Q86VK4 478 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 ZCCHC9Q8N567 271 aaKnown RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 KCTD6Q8NC69 237 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 GPRC5AQ8NFJ5 357 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.57□□□□□ -1.68
CCDC59-204ENST00000550589 RAPGEF5Q92565 580 aa4.57□□□□□ -1.68
CCDC59-204ENST00000550589 NKD2Q969F2 451 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms