RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 PTPROQ16827 1216 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 RAB41Q5JT25 222 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 LLGL2Q6P1M3 1020 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 SYDE1Q6ZW31 735 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-214ENST00000550168 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 ZNF280BQ86YH2 543 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 PSTKQ8IV42 348 aaKnown RBP13.18□□□□□ -0.3
CACNB3-214ENST00000550168 CCDC50Q8IVM0 306 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 MAP7D3Q8IWC1 876 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 JOSD2Q8TAC2 188 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 GRK7Q8WTQ7 553 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
CACNB3-214ENST00000550168 RXFP2Q8WXD0 754 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 KRT12Q99456 494 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 PKMYT1Q99640 499 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 FAM129AQ9BZQ8 928 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
CACNB3-214ENST00000550168 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 F8VP50 259 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 NDC80O14777 642 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 NRP1O14786 923 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 PRPSAP2O60256 369 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 GPR37L1O60883 481 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 KRT1P04264 644 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 SYN1P17600 705 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 FGFR3P22607 806 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 MATKP42679 507 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 MARCKSL1P49006 195 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 AIF1P55008 147 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 SLC25A11Q02978 314 aaKnown RBP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 ZNF211Q13398 564 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 CUL1Q13616 776 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 NAA30Q147X3 362 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 PDK2Q15119 407 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 FBXO38Q6PIJ6 1188 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 VSTM1Q6UX27 236 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 SPATA2LQ8IUW3 424 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 DIS3LQ8TF46 1054 aaKnown RBP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 TSC1Q92574 1164 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 SLCO2A1Q92959 643 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 PAWRQ96IZ0 340 aaKnown RBP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 RTP3Q9BQQ7 232 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 LRRC1Q9BTT6 524 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 OSBPL8Q9BZF1 889 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 ZCWPW1Q9H0M4 648 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 LRRC19Q9H756 370 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 EHD2Q9NZN4 543 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 TJP2Q9UDY2 1190 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 PCYOX1Q9UHG3 505 aa13.17□□□□□ -0.3
CACNB3-214ENST00000550168 KMT2BQ9UMN6 2715 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-214ENST00000550168 TSC2P49815 1807 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 FAM170AA1A519 330 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 TRIM66O15016 1216 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 MDM4O15151 490 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 HCRTO43612 131 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 ATP2C2O75185 946 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 DGKIO75912 1065 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 LCP1P13796 627 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 KCNA4P22459 653 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 NOS2P35228 1153 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 MAGEA11P43364 429 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 TAS2R40P59535 323 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 RNASE9P60153 205 aaKnown RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 YWHAZP63104 245 aaKnown RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 ADIGQ0VDE8 80 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 TFDP3Q5H9I0 405 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 FUT10Q6P4F1 479 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 DRICH1Q6PGQ1 229 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 DEFB128Q7Z7B8 93 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 CMTR2Q8IYT2 770 aaKnown RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 CENPIQ92674 756 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 SLITRK1Q96PX8 696 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 AP1M1Q9BXS5 423 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 POPDC2Q9HBU9 364 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 SMARCAL1Q9NZC9 954 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 USP18Q9UMW8 372 aa13.16□□□□□ -0.3
CACNB3-214ENST00000550168 PRG3Q9Y2Y8 225 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 UTP11Q9Y3A2 253 aaKnown RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 TIMM13Q9Y5L4 95 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-214ENST00000550168 TULP2O00295 520 aa13.15□□□□□ -0.3
CACNB3-214ENST00000550168 ZNF189O75820 626 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-214ENST00000550168 HEXIM1O94992 359 aaKnown RBP13.15□□□□□ -0.3
CACNB3-214ENST00000550168 GJB6O95452 261 aa13.15□□□□□ -0.3
CACNB3-214ENST00000550168 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms