RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 OVCH1Q7RTY7 1134 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 PLPPR4Q7Z2D5 763 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 STK32CQ86UX6 486 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 LRRTM3Q86VH5 581 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 DDX42Q86XP3 938 aaKnown RBP eCLIP7.13□□□□□ -1.27
UBE2N-204ENST00000549833 LINC00301Q8NCQ3 95 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 RDM1Q8NG50 284 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 TRAPPC12Q8WVT3 735 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 ZSWIM3Q96MP5 696 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 LXNQ9BS40 222 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 KATNAL1Q9BW62 490 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 DLL4Q9NR61 685 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 ERAP1Q9NZ08 941 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 CHMP5Q9NZZ3 219 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 SAMD15Q9P1V8 674 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 WRAP73Q9P2S5 460 aaPredicted RBP7.13□□□□□ -1.27
UBE2N-204ENST00000549833 HDAC6Q9UBN7 1215 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 LRWD1Q9UFC0 647 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 MCM8Q9UJA3 840 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 FBXO2Q9UK22 296 aaPredicted RBP7.13□□□□□ -1.27
UBE2N-204ENST00000549833 G3BP2Q9UN86 482 aaKnown RBP7.13□□□□□ -1.27
UBE2N-204ENST00000549833 ATP11BQ9Y2G3 1177 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 TTC3P53804 2025 aa7.13□□□□□ -1.27
UBE2N-204ENST00000549833 TDRD15B5MCY1 1934 aaKnown RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 SLC12A8A0AV02 714 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 HIP1RO75146 1068 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 SLITRK3O94933 977 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 STBD1O95210 358 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 YEATS4O95619 227 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 CCT6AP40227 531 aaKnown RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 QARSP47897 775 aaKnown RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 CDK7P50613 346 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 PSMC5P62195 406 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 KRT85P78386 507 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 TLE2Q04725 743 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 DLX2Q07687 328 aaPredicted RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 PPFIA1Q13136 1202 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 PDIA5Q14554 519 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 ZNF460Q14592 562 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 ZRSR1Q15695 479 aaKnown RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 SPECC1Q5M775 1068 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 CD276Q5ZPR3 534 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 NFRKBQ6P4R8 1299 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 LIPIQ6XZB0 460 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 USP49Q70CQ1 688 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 UBE2R2Q712K3 238 aaPredicted RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 TPH2Q8IWU9 490 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 C7orf31Q8N865 590 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 ATP8B4Q8TF62 1192 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 LMBR1Q8WVP7 490 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 ATP6V0A1Q93050 837 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 ZBTB10Q96DT7 871 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 CTAGE1Q96RT6 745 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 PLIN2Q99541 437 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 HSD17B14Q9BPX1 270 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 SYT3Q9BQG1 590 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 SH2D3AQ9BRG2 576 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 MMTAG2Q9BU76 263 aaKnown RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 CSRNP2Q9H175 543 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 TRPV6Q9H1D0 765 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 TRMT13Q9NUP7 481 aaKnown RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 SETD4Q9NVD3 440 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 SPATA6Q9NWH7 488 aaPredicted RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 SRPRBQ9Y5M8 271 aaKnown RBP7.12□□□□□ -1.27
UBE2N-204ENST00000549833 ANK1P16157 1881 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 MYO7AQ13402 2215 aa7.12□□□□□ -1.27
UBE2N-204ENST00000549833 PDCD11Q14690 1871 aaKnown RBP7.11□□□□□ -1.27
UBE2N-204ENST00000549833 NLRC5Q86WI3 1866 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 C17orf102A2RUQ5 167 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 PRAMEF25A6NGN4 478 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 ACOT7O00154 380 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 KCNK3O14649 394 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 HBP1O60381 514 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 B4GALT4O60513 344 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 CD4P01730 458 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 CYP2C9P11712 490 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 INSRRP14616 1297 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 RPL13P26373 211 aaKnown RBP7.11□□□□□ -1.27
UBE2N-204ENST00000549833 LONP1P36776 959 aaKnown RBP7.11□□□□□ -1.27
UBE2N-204ENST00000549833 SLC26A2P50443 739 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 NPEPPSP55786 919 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 PTGISQ16647 500 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 XKR3Q5GH77 459 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 ODR4Q5SWX8 454 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 MARCH8Q5T0T0 291 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 PIK3R6Q5UE93 754 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 KRT79Q5XKE5 535 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 PLA2G4FQ68DD2 849 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 ATL3Q6DD88 541 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 SESTD1Q86VW0 696 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 PROSER1Q86XN7 944 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 CATSPER3Q86XQ3 398 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 CARFQ8N187 725 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 AFAP1L2Q8N4X5 818 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 ERMNQ8TAM6 284 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 NEK9Q8TD19 979 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 PIGOQ8TEQ8 1089 aa7.11□□□□□ -1.27
UBE2N-204ENST00000549833 LEO1Q8WVC0 666 aaPredicted RBP7.11□□□□□ -1.27
UBE2N-204ENST00000549833 TNPO1Q92973 898 aaKnown RBP7.11□□□□□ -1.27
UBE2N-204ENST00000549833 EPSTI1Q96J88 318 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms