RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 INTS13Q9NVM9 706 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 EIF2B4Q9UI10 523 aaKnown RBP7.5□□□□□ -1.21
FGD6-205ENST00000549499 FNDC3AQ9Y2H6 1198 aaKnown RBP7.5□□□□□ -1.21
FGD6-205ENST00000549499 KIAA1671Q9BY89 1806 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 SLC12A8A0AV02 714 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 TGFB1I1O43294 461 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 CAVIN2O95810 425 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 EPHX1P07099 455 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 HMGA1P17096 107 aaKnown RBP7.5□□□□□ -1.21
FGD6-205ENST00000549499 SLC5A3P53794 718 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 ADAM9Q13443 819 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 SLC39A14Q15043 492 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 TAF3Q5VWG9 929 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 TDRD10Q5VZ19 366 aaKnown RBP7.5□□□□□ -1.21
FGD6-205ENST00000549499 BTBD8Q5XKL5 378 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 EGFLAMQ63HQ2 1017 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 PSMG2Q969U7 264 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 CYFIP2Q96F07 1278 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 SLITRK1Q96PX8 696 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 SCNM1Q9BWG6 230 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 PDCL3Q9H2J4 239 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 NMUR1Q9HB89 426 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 ANK1P16157 1881 aa7.5□□□□□ -1.21
FGD6-205ENST00000549499 A0A1W2PQH9 124 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 CARNS1A5YM72 827 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 LONP1P36776 959 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 PLCB2Q00722 1185 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 SV2CQ496J9 727 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 PPP4R3CPQ6ZMV5 832 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 ADAT2Q7Z6V5 191 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 MAP4K3Q8IVH8 894 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 DCP1BQ8IZD4 617 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 XXYLT1Q8NBI6 393 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 GOLPH3LQ9H4A5 285 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 DLGAP2Q9P1A6 1054 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 FNIP2Q9P278 1114 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 SRPRBQ9Y5M8 271 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 ATG2AQ2TAZ0 1938 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 CACNA1DQ01668 2161 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 TRAV19A0A0A6YYK7 116 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 LNP1A1A4G5 178 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 COCHO43405 550 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 FSBPO95073 299 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 LETM1O95202 739 aaPredicted RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 F13A1P00488 732 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 PDCP20941 246 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 PMS1P54277 932 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 TMEM270Q6UE05 265 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 SV2AQ7L0J3 742 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 TMC8Q8IU68 726 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 FBXL16Q8N461 479 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 ZCCHC9Q8N567 271 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 NXPE3Q969Y0 559 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 GDE1Q9NZC3 331 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 TJP2Q9UDY2 1190 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 XPO7Q9UIA9 1087 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 SNX10Q9Y5X0 201 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 TADA3O75528 432 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 KAT7O95251 611 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 HNRNPA1P09651 372 aaKnown RBP eCLIP7.49□□□□□ -1.21
FGD6-205ENST00000549499 ZSCAN22P10073 491 aaPredicted RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 VAV1P15498 845 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 YWHAQP27348 245 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 RPL9P32969 192 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 PPP3CAQ08209 521 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 FZD5Q13467 585 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 TAF5Q15542 800 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 TMEM119Q4V9L6 283 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 SCUBE3Q8IX30 993 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 B3GALNT2Q8NCR0 500 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 CACTINQ8WUQ7 758 aaKnown RBP7.49□□□□□ -1.21
FGD6-205ENST00000549499 SPIRE2Q8WWL2 714 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 CCDC51Q96ER9 411 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 LRIG1Q96JA1 1093 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 TRAIPQ9BWF2 469 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 TMPRSS4Q9NRS4 437 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 OSER1Q9NX31 292 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.49□□□□□ -1.21
FGD6-205ENST00000549499 PLXNA3P51805 1871 aa7.49□□□□□ -1.21
FGD6-205ENST00000549499 SYN3O14994 580 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 SH3BP5O60239 455 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 TULP3O75386 442 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 AKAP3O75969 853 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 HLA-DRAP01903 254 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 HOXB2P14652 356 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 KCNE1P15382 129 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 INTS6LQ5JSJ4 861 aaKnown RBP7.48□□□□□ -1.21
FGD6-205ENST00000549499 PRSS36Q5K4E3 855 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 RHBDF2Q6PJF5 856 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 ZPBP2Q6X784 338 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 TMEM134Q9H6X4 195 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 EPS15L1Q9UBC2 864 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 PRRT4C9JH25 899 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 PIRO00625 290 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 KRT9P35527 623 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 NCKAP1LP55160 1127 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 NME3Q13232 169 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 DHCR24Q15392 516 aa7.48□□□□□ -1.21
FGD6-205ENST00000549499 KCTD19Q17RG1 926 aaPredicted RBP7.48□□□□□ -1.21
FGD6-205ENST00000549499 CCDC40Q4G0X9 1142 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms