RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 TRIM58Q8NG06 486 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 NEK11Q8NG66 645 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 CAGE1Q8TC20 777 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 AFAP1L1Q8TED9 768 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 NELFBQ8WX92 580 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 RIN2Q8WYP3 895 aaPredicted RBP4.73□□□□□ -1.65
USP25-210ENST00000549362 KAT5Q92993 513 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 DHTKD1Q96HY7 919 aaPredicted RBP4.73□□□□□ -1.65
USP25-210ENST00000549362 AK8Q96MA6 479 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 ALS2CR12Q96Q35 445 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 RUFY1Q96T51 708 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 LZTS2Q9BRK4 669 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 DESI2Q9BSY9 194 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 B3GNT5Q9BYG0 378 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 TMEM60Q9H2L4 133 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 ZNF552Q9H707 407 aaPredicted RBP4.73□□□□□ -1.65
USP25-210ENST00000549362 ANKZF1Q9H8Y5 726 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 MRPL44Q9H9J2 332 aaKnown RBP4.73□□□□□ -1.65
USP25-210ENST00000549362 ZNF287Q9HBT7 754 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 PDE11AQ9HCR9 933 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 EPB41L4AQ9HCS5 686 aaPredicted RBP4.73□□□□□ -1.65
USP25-210ENST00000549362 NLRC4Q9NPP4 1024 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 CASS4Q9NQ75 786 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 ATP8A2Q9NTI2 1148 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 TCP11L1Q9NUJ3 509 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 KLHL11Q9NVR0 708 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 POLR3BQ9NW08 1133 aaPredicted RBP4.73□□□□□ -1.65
USP25-210ENST00000549362 RNF14Q9UBS8 474 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 CAPN11Q9UMQ6 739 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 PLA2G2DQ9UNK4 145 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 STXBP5LQ9Y2K9 1186 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 IPPQ9Y573 584 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 CFAP20Q9Y6A4 193 aaKnown RBP4.73□□□□□ -1.65
USP25-210ENST00000549362 DOCK2Q92608 1830 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 MYH6P13533 1939 aa4.73□□□□□ -1.65
USP25-210ENST00000549362 COL5A2P05997 1499 aaPredicted RBP4.73□□□□□ -1.65
USP25-210ENST00000549362 PDS5AQ29RF7 1337 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 ECM29Q5VYK3 1845 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 CFAP69A5D8W1 941 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 EIF3CLB5ME19 914 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 H0Y858 1186 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 HRKO00198 91 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 TBX3O15119 743 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 PRAMEF4O60810 478 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 IL18BPO95998 194 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 HRGP04196 525 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 GYPCP04921 128 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 PARP1P09874 1014 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 RHOXF2BP0C7M4 288 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 PRLRP16471 622 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 TCP1P17987 556 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 TRIM21P19474 475 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 GLDCP23378 1020 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 GPTP24298 496 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 EDNRBP24530 442 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 GUCY1A2P33402 732 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 THBS2P35442 1172 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 CCT6AP40227 531 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 UBA7P41226 1012 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 MAGEA9P43362 315 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 STX17P56962 302 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 GJA9P57773 515 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 ZBED6P86452 979 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 PPFIA1Q13136 1202 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 CNN3Q15417 329 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 STILQ15468 1287 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 PFKFB3Q16875 520 aaPredicted RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 ZNF827Q17R98 1081 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 GLE1Q53GS7 698 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 HSP90AA4PQ58FG1 418 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 DNAJC21Q5F1R6 531 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 CCDC122Q5T0U0 273 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 PAPD7Q5XG87 772 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 C1orf228Q6PIY5 440 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 CLEC4GQ6UXB4 293 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 MICALCLQ6ZW33 695 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 TMTC3Q6ZXV5 915 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 APTXQ7Z2E3 356 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 TRAPPC11Q7Z392 1133 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 LDHDQ86WU2 507 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 ZNF34Q8IZ26 560 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 LCORLQ8N3X6 602 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 MB21D1Q8N884 522 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 VPS37AQ8NEZ2 397 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 FAM76AQ8TAV0 307 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 CXorf38Q8TB03 319 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 JAKMIP2Q96AA8 810 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 RGMAQ96B86 450 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 CDK5RAP3Q96JB5 506 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 WDR92Q96MX6 357 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 UHRF1Q96T88 793 aaPredicted RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 EIF3CQ99613 913 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 SYT3Q9BQG1 590 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 SLF1Q9BQI6 1058 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 RHOXF2Q9BQY4 288 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 APOL5Q9BWW9 433 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 RAB34Q9BZG1 259 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 CRNKL1Q9BZJ0 848 aaKnown RBP4.72□□□□□ -1.65
USP25-210ENST00000549362 EDEM3Q9BZQ6 932 aa4.72□□□□□ -1.65
USP25-210ENST00000549362 CCSER1Q9C0I3 900 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms