RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 PER2O15055 1255 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 SEC24AO95486 1093 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ZBED1O96006 694 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 FTLP02792 175 aaPredicted RBP10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 RALAP11233 206 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 EPCAMP16422 314 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 MTHFRP42898 656 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 TUBP50607 506 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 TKTL1P51854 596 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 GPC5P78333 572 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ADIGQ0VDE8 80 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 MTA1Q13330 715 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ADAM15Q13444 863 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 KCNC3Q14003 757 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 COL19A1Q14993 1142 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 DDR2Q16832 855 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ASTE1Q2TB18 679 aaPredicted RBP10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ARHGAP15Q53QZ3 475 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 PM20D1Q6GTS8 502 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 PDZD4Q76G19 769 aaPredicted RBP10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ADGRD2Q7Z7M1 963 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 RHOT2Q8IXI1 618 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ZNF276Q8N554 614 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 C3orf20Q8ND61 904 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ZMIZ2Q8NF64 920 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 VN1R2Q8NFZ6 395 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 FBXO32Q969P5 355 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 NECTIN4Q96NY8 510 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 CHP1Q99653 195 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ZSWIM1Q9BR11 485 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 ACP6Q9NPH0 428 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 IL37Q9NZH6 218 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 TRPM5Q9NZQ8 1165 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 UVRAGQ9P2Y5 699 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 COG5Q9UP83 839 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC27A5Q9Y2P5 690 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 USP3Q9Y6I4 520 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 A0A087X0T9 212 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 CCDC195A0A1B0GUA6 201 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 HHLA1C9JL84 531 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 TNFRSF10BO14763 440 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 ZSCAN12O43309 604 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 HSF2BPO75031 334 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 VNN2O95498 520 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 ERBB2P04626 1255 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 CCDC175P0C221 793 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 TMEM253P0C7T8 217 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 FAM228BP0C875 321 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 ATF6P18850 670 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 MAGEA1P43355 309 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 EPHA5P54756 1037 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 MRPS5P82675 430 aaKnown RBP10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 CTC1Q2NKJ3 1217 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 PTPN20Q4JDL3 420 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 ANKRD54Q6NXT1 300 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 PMF1Q6P1K2 205 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 LLGL2Q6P1M3 1020 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 DNAJC24Q6P3W2 148 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 MON1BQ7L1V2 547 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC26A9Q7LBE3 791 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 DNAJB7Q7Z6W7 309 aaPredicted RBP10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 KIAA1328Q86T90 577 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 MCOLN2Q8IZK6 566 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 MICALL1Q8N3F8 863 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 CPA5Q8WXQ8 436 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 SMG7Q92540 1137 aaKnown RBP10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 MRPS31Q92665 395 aaKnown RBP10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 CPXM1Q96SM3 734 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 KCNK16Q96T55 309 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 CDX2Q99626 313 aaPredicted RBP10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 SELENOOQ9BVL4 669 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 IGFLR1Q9H665 355 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 ABCC13Q9NSE7 274 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 CLDND1Q9NY35 253 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 CLIC5Q9NZA1 410 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 STAP1Q9ULZ2 295 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 PAXBP1Q9Y5B6 917 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 PCDHGC5Q9Y5F6 944 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 ZFP37Q9Y6Q3 630 aaPredicted RBP10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 DENND4CQ5VZ89 1909 aa10.26□□□□□ -0.77
SMARCD1-206ENST00000549274 A0A0A6YYK5 440 aaPredicted RBP10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 SOWAHDA6NJG2 315 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 E5RJQ4 531 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 CAPN9O14815 690 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 KRT86O43790 486 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 PLEKP08567 350 aaPredicted RBP10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 LCP1P13796 627 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 RGS7P49802 495 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 KPNA1P52294 538 aaPredicted RBP10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 VAV2P52735 878 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 DAOAP59103 153 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC6A3Q01959 620 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 GFPT1Q06210 699 aaPredicted RBP10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 GOLGA8FQ08AF8 430 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 GOLGA8DPQ0D2H9 430 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 KIF5AQ12840 1032 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 PUS10Q3MIT2 529 aaKnown RBP10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 ATAT1Q5SQI0 421 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 FAM102AQ5T9C2 384 aaPredicted RBP10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 SNX30Q5VWJ9 437 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms