RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IRAK1BP1Q5VVH5 260 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 MAP1SQ66K74 1059 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 NCAPH2Q6IBW4 605 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 EFCAB12Q6NXP0 572 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 SV2AQ7L0J3 742 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 MCOLN2Q8IZK6 566 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 FAM169BQ8N8A8 192 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 SEMA4DQ92854 862 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 LRRC39Q96DD0 335 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 TRIM56Q9BRZ2 755 aaKnown RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 TSPYL1Q9H0U9 437 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 UNC93B1Q9H1C4 597 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 LUC7LQ9NQ29 371 aaKnown RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 PRDM9Q9NQV7 894 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 SYCE3A1L190 88 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 EIF3FO00303 357 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 MAP2K7O14733 419 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 FANCGO15287 622 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 NCAM2O15394 837 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 NBNO60934 754 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ADCY5O95622 1261 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 MCM3P25205 808 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 KLRC1P26715 233 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CXCR3P49682 368 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 GDF10P55107 478 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 RPL26P61254 145 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 LY6KQ17RY6 165 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 FKBP15Q5T1M5 1219 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 PPFIBP1Q86W92 1011 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TMC8Q8IU68 726 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 MYCBPAPQ8TBZ2 947 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 SPPL2BQ8TCT7 592 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 SUSD6Q92537 303 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 PPP1R13BQ96KQ4 1090 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TRIB3Q96RU7 358 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 FAM105AQ9NUU6 356 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TBC1D13Q9NVG8 400 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 LGALS13Q9UHV8 139 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 RPL26L1Q9UNX3 145 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 IPPQ9Y573 584 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TMEM131Q92545 1883 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 DENND3A2RUS2 1198 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 F8W031 263 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 NUDT17P0C025 328 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CCL5P13501 91 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TPSB2P20231 275 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 NR2F2P24468 414 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ADCYAP1R1P41586 468 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 PSMC4P43686 418 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 DRP2Q13474 957 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 PTK6Q13882 451 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TPSAB1Q15661 275 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 C21orf62-AS1Q17RA5 79 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 C10orf62Q5T681 223 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CEP135Q66GS9 1140 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 GDPD4Q6W3E5 623 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 C14orf80Q86SX3 495 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 NLRP14Q86W24 1093 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 DDX42Q86XP3 938 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 SCUBE3Q8IX30 993 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 LMNTD2Q8IXW0 634 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 SLC35B2Q8TB61 432 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CEP170P1Q96L14 293 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 DUSP16Q9BY84 665 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 IFIH1Q9BYX4 1025 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 PDFQ9HBH1 243 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 WDR6Q9NNW5 1121 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 XPNPEP3Q9NQH7 507 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 PSD3Q9NYI0 1048 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 FAM8A1Q9UBU6 413 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CTNND2Q9UQB3 1225 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 EML5Q05BV3 1969 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 KLHL33A6NCF5 533 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 C2CD4BA6NLJ0 364 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 A6NNZ2 444 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ERI2A8K979 691 aaKnown RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 EFCAB8A8MWE9 144 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 IFRD1O00458 451 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 PROSCO94903 275 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 RTN3O95197 1032 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ZRANB2O95218 330 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 SOD2P04179 222 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 HAPLN1P10915 354 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 HOXB3P14651 431 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ACPPP15309 386 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CYP11B1P15538 503 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 RXRAP19793 462 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 FLT3P36888 993 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 FLT3LGP49771 235 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ZNF143P52747 638 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ARFIP1P53367 373 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 ASIC1P78348 528 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 STRN3Q13033 797 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 IFT88Q13099 833 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 KCNA10Q16322 511 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TUBB8Q3ZCM7 444 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 CCDC81Q6ZN84 652 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 TIFABQ6ZNK6 161 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 XYLT1Q86Y38 959 aa5.16□□□□□ -1.58
SCAF11-212ENST00000549162 VN1R2Q8NFZ6 395 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms