RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CHKBQ9Y259 395 aa14.75□□□□□ -0.05
CACNB3-209ENST00000548860 IRF6O14896 467 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 DYNC1LI2O43237 492 aaPredicted RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 LYPLA1O75608 230 aaPredicted RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 HSPA4LO95757 839 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 DPYSL3Q14195 570 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 DNAJC9Q8WXX5 260 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 CDKL2Q92772 493 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 HAPLN2Q9GZV7 340 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 MAN1C1Q9NR34 630 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 ZFATQ9P243 1243 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 PIN4Q9Y237 131 aaKnown RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 SLC4A7Q9Y6M7 1214 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 PLCH1Q4KWH8 1693 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 CNTNAP1P78357 1384 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 A0A0B4J269 797 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 GOLGA8CPA6NN73 597 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 SPDYE16A6NNV3 312 aaPredicted RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 MAP3K7O43318 606 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 TMEM63AO94886 807 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 SARNPP82979 210 aaKnown RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 STX3Q13277 289 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 CUL3Q13618 768 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 RASA2Q15283 850 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 SIX1Q15475 284 aaPredicted RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 ZNF772Q68DY9 489 aaPredicted RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 TWF2Q6IBS0 349 aaKnown RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 FAM228AQ86W67 206 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 BRSK2Q8IWQ3 736 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 SIX6OS1Q8N1H7 587 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 GRAMD1AQ96CP6 724 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 SRPK1Q96SB4 655 aaKnown RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 MRIQ9BWK5 157 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 NT5C1AQ9BXI3 368 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 ARL8BQ9NVJ2 186 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 SNTG2Q9NY99 539 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 NKX1-2Q9UD57 310 aaPredicted RBP14.74□□□□□ -0.05
CACNB3-209ENST00000548860 FCHO1O14526 889 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 AIM2O14862 343 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 RGS20O76081 388 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 UNC5CO95185 931 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 GHRP10912 638 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 CCDC130P13994 396 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 GRIA1P42261 906 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 CPT1BQ92523 772 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 CD101Q93033 1021 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 CENPTQ96BT3 561 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 TMEM176AQ96HP8 235 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 OSMRQ99650 979 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 ARHGAP28Q9P2N2 729 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 NUDT5Q9UKK9 219 aa14.74□□□□□ -0.05
CACNB3-209ENST00000548860 MPZL3Q6UWV2 235 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 HASPINQ8TF76 798 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 NAF1Q96HR8 494 aaKnown RBP14.73□□□□□ -0.05
CACNB3-209ENST00000548860 R3HDMLQ9H3Y0 253 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 PCDH9Q9HC56 1237 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 SETD4Q9NVD3 440 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 hCG_2014768A0A024R1R8 64 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 MAFGO15525 162 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 SERPINB4P48594 390 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 ARPP19P56211 112 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 IER5Q5VY09 327 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 WDR75Q8IWA0 830 aaKnown RBP14.73□□□□□ -0.05
CACNB3-209ENST00000548860 PIWIL1Q96J94 861 aaKnown RBP14.73□□□□□ -0.05
CACNB3-209ENST00000548860 SPATC1LQ9H0A9 340 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 GOLGA2P5Q9HBQ8 144 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 DPP3Q9NY33 737 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 TCRBV9S1A1TA0A576 114 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 KLRG2A4D1S0 409 aaPredicted RBP14.73□□□□□ -0.05
CACNB3-209ENST00000548860 ASS1P00966 412 aaKnown RBP14.73□□□□□ -0.05
CACNB3-209ENST00000548860 PGGT1BP53609 377 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 MXD4Q14582 209 aaPredicted RBP14.73□□□□□ -0.05
CACNB3-209ENST00000548860 NSL1Q96IY1 281 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 VCXQ9H320 206 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 ATXN3LQ9H3M9 355 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 STOML1Q9UBI4 398 aa14.73□□□□□ -0.05
CACNB3-209ENST00000548860 APOBEC2Q9Y235 224 aaKnown RBP14.73□□□□□ -0.05
CACNB3-209ENST00000548860 NVLO15381 856 aaKnown RBP14.72□□□□□ -0.05
CACNB3-209ENST00000548860 EDN1P05305 212 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 SNRPAP09012 282 aaKnown RBP14.72□□□□□ -0.05
CACNB3-209ENST00000548860 KCTD17Q8N5Z5 321 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 FAM13CQ8NE31 585 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 PRR11Q96HE9 360 aaPredicted RBP14.72□□□□□ -0.05
CACNB3-209ENST00000548860 LGMNQ99538 433 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 RNPEPQ9H4A4 650 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 MINDY3Q9H8M7 445 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 ZNF214Q9UL59 606 aaPredicted RBP14.72□□□□□ -0.05
CACNB3-209ENST00000548860 WDR27A2RRH5 827 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 E9PBE3 544 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 KLHL41O60662 606 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 CCDC22O60826 627 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 ZC3H11AO75152 810 aaKnown RBP eCLIP14.72□□□□□ -0.05
CACNB3-209ENST00000548860 USP1O94782 785 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 VGLL4Q14135 290 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 C3orf20Q8ND61 904 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 RSAD1Q9HA92 442 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 TNRC6CQ9HCJ0 1690 aaKnown RBP14.72□□□□□ -0.05
CACNB3-209ENST00000548860 ATP4AP20648 1035 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 CDKN2BP42772 138 aa14.72□□□□□ -0.05
CACNB3-209ENST00000548860 OLIG2Q13516 323 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms