RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SLC5A3P53794 718 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 SATB1Q01826 763 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 IFRD2Q12894 506 aaPredicted RBP12.06□□□□□ -0.48
BEST3-209ENST00000548658 GAS6Q14393 721 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 HECTD3Q5T447 861 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 SPOPLQ6IQ16 392 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 CYFIP2Q96F07 1278 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 DHTKD1Q96HY7 919 aaPredicted RBP12.06□□□□□ -0.48
BEST3-209ENST00000548658 RNF38Q9H0F5 515 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 MMRN2Q9H8L6 949 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 METTL14Q9HCE5 456 aaKnown RBP12.06□□□□□ -0.48
BEST3-209ENST00000548658 PNPLA8Q9NP80 782 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 TMEM30AQ9NV96 361 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 RAB20Q9NX57 234 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 CHORDC1Q9UHD1 332 aaPredicted RBP12.06□□□□□ -0.48
BEST3-209ENST00000548658 RAB23Q9ULC3 237 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 WNT6Q9Y6F9 365 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 CCDC163A0A0D9SF12 145 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 E2F8A0AVK6 867 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 CHURC1-FNTBB4DL54 471 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 CILPO75339 1184 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 MBL2P11226 248 aaPredicted RBP12.05□□□□□ -0.48
BEST3-209ENST00000548658 MAP3K7CLP57077 242 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 TCERG1LQ5VWI1 586 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 ANKRD40Q6AI12 368 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 FSTL4Q6MZW2 842 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 LONP2Q86WA8 852 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 ADGRG2Q8IZP9 1017 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 C12orf29Q8N999 325 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 SCAMP5Q8TAC9 235 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 RIN3Q8TB24 985 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 CD101Q93033 1021 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 OTUB2Q96DC9 234 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 EEF2KMTQ96G04 330 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 SMOQ99835 787 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 DUSP9Q99956 384 aaKnown RBP12.05□□□□□ -0.48
BEST3-209ENST00000548658 NACA2Q9H009 215 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 LINC00597Q9H2U6 94 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 TLR8Q9NR97 1041 aaKnown RBP12.05□□□□□ -0.48
BEST3-209ENST00000548658 NCDNQ9UBB6 729 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 ARMCX3Q9UH62 379 aaPredicted RBP12.05□□□□□ -0.48
BEST3-209ENST00000548658 CPQQ9Y646 472 aa12.05□□□□□ -0.48
BEST3-209ENST00000548658 KIF26AQ9ULI4 1882 aaPredicted RBP12.05□□□□□ -0.48
BEST3-209ENST00000548658 COCHO43405 550 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 ZDHHC11BP0C7U3 371 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 CCDC130P13994 396 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 CD58P19256 250 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 PSEN1P49768 467 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 SLC8A3P57103 927 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 YWHAEP62258 255 aaKnown RBP12.04□□□□□ -0.48
BEST3-209ENST00000548658 GOLGA8FQ08AF8 430 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 GOLGA8DPQ0D2H9 430 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 CETN1Q12798 172 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 FOXR2Q6PJQ5 311 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 Q6ZS52 159 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 TADA2BQ86TJ2 420 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 ZC3H3Q8IXZ2 948 aaKnown RBP12.04□□□□□ -0.48
BEST3-209ENST00000548658 CAMKK1Q8N5S9 505 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 ELMO3Q96BJ8 720 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 HEXIM2Q96MH2 286 aaKnown RBP12.04□□□□□ -0.48
BEST3-209ENST00000548658 APOBEC3GQ9HC16 384 aaKnown RBP12.04□□□□□ -0.48
BEST3-209ENST00000548658 FAM49BQ9NUQ9 324 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 SMPD4Q9NXE4 827 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 CFAP97Q9P2B7 532 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 HMGXB4Q9UGU5 601 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 GMEB2Q9UKD1 530 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 SLC8A2Q9UPR5 921 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 COQ4Q9Y3A0 265 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 SH3BP1Q9Y3L3 701 aa12.04□□□□□ -0.48
BEST3-209ENST00000548658 BICDL2A1A5D9 508 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 K7ESF4 209 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 BEST1O76090 585 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 ADH1CP00326 375 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 EGFP01133 1207 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 ADORA2BP29275 332 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 EIF2DP41214 584 aaKnown RBP12.03□□□□□ -0.48
BEST3-209ENST00000548658 ZXDBP98169 803 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 ORC1Q13415 861 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 PREPLQ4J6C6 727 aaPredicted RBP12.03□□□□□ -0.48
BEST3-209ENST00000548658 DCAF17Q5H9S7 520 aaPredicted RBP12.03□□□□□ -0.48
BEST3-209ENST00000548658 CLEC20AQ6ZU45 233 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 FILIP1Q7Z7B0 1213 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 ZMIZ2Q8NF64 920 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 WHAMMQ8TF30 809 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 ACDQ96AP0 544 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 CHFRQ96EP1 664 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 TMEM176AQ96HP8 235 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 CEP63Q96MT8 703 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 TWNKQ96RR1 684 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 DUSP16Q9BY84 665 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 UBXN6Q9BZV1 441 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.03□□□□□ -0.48
BEST3-209ENST00000548658 CISHQ9NSE2 258 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 SMG5Q9UPR3 1016 aaKnown RBP12.03□□□□□ -0.48
BEST3-209ENST00000548658 SCML2Q9UQR0 700 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 CFAP54Q96N23 3096 aa12.03□□□□□ -0.48
BEST3-209ENST00000548658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.02□□□□□ -0.49
BEST3-209ENST00000548658 PMM2O15305 246 aa12.02□□□□□ -0.49
BEST3-209ENST00000548658 TLR5O60602 858 aa12.02□□□□□ -0.49
BEST3-209ENST00000548658 RNF40O75150 1001 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms