RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 GHRP10912 638 aa19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 SLC6A3Q01959 620 aa19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 ZC3H12AQ5D1E8 599 aaKnown RBP19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 SCYL2Q6P3W7 929 aa19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 NOTUMQ6P988 496 aa19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 DARS2Q6PI48 645 aaKnown RBP19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 TMEM110Q86TL2 294 aa19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 B3GNT5Q9BYG0 378 aa19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 ADAM33Q9BZ11 813 aa19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 TRABDQ9H4I3 376 aa19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 XPO7Q9UIA9 1087 aaKnown RBP19.36■□□□□ 0.69
PRPF40B-208ENST00000548436 PAPSS1O43252 624 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 RECQL4O94761 1208 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 AKAP5P24588 427 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 FOXN2P32314 431 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 YARSP54577 528 aaKnown RBP19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 BASP1P80723 227 aaKnown RBP19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 ROR1Q01973 937 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 EFTUD2Q15029 972 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 FAM110CQ1W6H9 321 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 SOWAHAQ2M3V2 549 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 EFHC2Q5JST6 749 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 C9orf57Q5W0N0 161 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 C1orf228Q6PIY5 440 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 PPP1R21Q6ZMI0 780 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 BEST2Q8NFU1 509 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 FAM172AQ8WUF8 416 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 NGRNQ9NPE2 291 aaKnown RBP19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 SLC24A2Q9UI40 661 aa19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 USP15Q9Y4E8 981 aaPredicted RBP19.35■□□□□ 0.69
PRPF40B-208ENST00000548436 A6NJR5 290 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 PIAS1O75925 651 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 DARSP14868 501 aaKnown RBP19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 KRT15P19012 456 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 TFDP2Q14188 446 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 KRT81Q14533 505 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 ZKSCAN8Q15776 578 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 FAM47CQ5HY64 1035 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 TRPM8Q7Z2W7 1104 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 APBB1IPQ7Z5R6 666 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 LRRC52Q8N7C0 313 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 FBXO36Q8NEA4 188 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 OR6B3Q8NGW1 331 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 DENND1AQ8TEH3 1009 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 LENG1Q96BZ8 264 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 APOL6Q9BWW8 343 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 CNTN3Q9P232 1028 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 NRCAMQ92823 1304 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 A0A1W2PPM1 405 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 F2P00734 622 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 SETSIPP0DME0 302 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 CYP2C9P11712 490 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 TAC1P20366 129 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 HNRNPH1P31943 449 aaKnown RBP19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 STIP1P31948 543 aaKnown RBP19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 CA9Q16790 459 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 C3orf62Q6ZUJ4 267 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 C4orf33Q8N1A6 199 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 PQLC3Q8N755 202 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 PLD5Q8N7P1 536 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 ATP11CQ8NB49 1132 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 SGSM3Q96HU1 749 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 PARK7Q99497 189 aaKnown RBP19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 ABCF3Q9NUQ8 709 aa19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 PSMC3IPQ9P2W1 217 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-208ENST00000548436 SMIM35A0A1B0GVV1 85 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 MBLAC1A4D2B0 266 aaPredicted RBP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 PRPF4O43172 522 aaKnown RBP eCLIP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 ASMTLO95671 621 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 TFE3P19532 575 aaPredicted RBP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 SDC4P31431 198 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 RDXP35241 583 aaKnown RBP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 GEMIN4P57678 1058 aaKnown RBP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 PDK2Q15119 407 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 RASA2Q15283 850 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 BBS9Q3SYG4 887 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 BOLA3Q53S33 107 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 CGB2Q6NT52 195 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 SESTD1Q86VW0 696 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 TMEM40Q8WWA1 233 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 SNRNP25Q9BV90 132 aaKnown RBP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 TRIM6Q9C030 488 aaPredicted RBP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 USP29Q9HBJ7 922 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 PCDH18Q9HCL0 1135 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 HESX1Q9UBX0 185 aa19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 GNEQ9Y223 722 aaKnown RBP19.33■□□□□ 0.69
PRPF40B-208ENST00000548436 ZNF236Q9UL36 1845 aa19.33■□□□□ 0.68
PRPF40B-208ENST00000548436 A8MXQ7 604 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 H7C0C1 242 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 PHBP35232 272 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 ATP5OP48047 213 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 HDAC4P56524 1084 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 CDC42EP1Q00587 391 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 SYCP2LQ5T4T6 812 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 SPRYD7Q5W111 196 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 UNC93AQ86WB7 457 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 IGDCC3Q8IVU1 814 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 MAP7D3Q8IWC1 876 aa19.32■□□□□ 0.68
PRPF40B-208ENST00000548436 PDIK1LQ8N165 341 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms