RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 OLIG1Q8TAK6 271 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 WHAMMQ8TF30 809 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 FBXO32Q969P5 355 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 SPACA7Q96KW9 195 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 C8orf48Q96LL4 319 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 MED10Q9BTT4 135 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 GTPBP2Q9BX10 602 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 ADAM33Q9BZ11 813 aa12.72□□□□□ -0.37
TRAFD1-205ENST00000548277 CFAP47Q6ZTR5 3102 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 TRIM24O15164 1050 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 COCHO43405 550 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 HYAL3O43820 417 aaPredicted RBP12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 ADAM23O75077 832 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 PHACTR2O75167 634 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 ADH1CP00326 375 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 OAS1P00973 400 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 SYT1P21579 422 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 KIR2DL1P43626 348 aaPredicted RBP12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 PPP3CCP48454 512 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 CDH8P55286 799 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 MYL6P60660 151 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 NOP14P78316 857 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 TRPC3Q13507 836 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 ANO4Q32M45 955 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 STXBP4Q6ZWJ1 553 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 NUP93Q8N1F7 819 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 OR2I1PQ8NGU4 316 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 SCAMP5Q8TAC9 235 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 ZNF516Q92618 1163 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 WBP2Q969T9 261 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 DHX58Q96C10 678 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 TTLL2Q9BWV7 592 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 CCSER2Q9H7U1 834 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 EHD2Q9NZN4 543 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 SH3BP1Q9Y3L3 701 aa12.71□□□□□ -0.37
TRAFD1-205ENST00000548277 ZFHX4Q86UP3 3567 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 KIAA0391O15091 583 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 HOXB3P14651 431 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 PFKLP17858 780 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 CASP1P29466 404 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 GRIA2P42262 883 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 CASP4P49662 377 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 ATXN3P54252 364 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 ASIC1P78348 528 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 GAD2Q05329 585 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 LMAN2Q12907 356 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 ORC1Q13415 861 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC39A14Q15043 492 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 STK38Q15208 465 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 SNRNP35Q16560 246 aaKnown RBP12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 LYSMD4Q5XG99 296 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 BTBD8Q5XKL5 378 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 TMEM25Q86YD3 366 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 SYT12Q8IV01 421 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 BBS7Q8IWZ6 715 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 ZNF513Q8N8E2 541 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 CGRRF1Q99675 332 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 NACA2Q9H009 215 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC32A1Q9H598 525 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 TBC1D14Q9P2M4 693 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 WASF3Q9UPY6 502 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
TRAFD1-205ENST00000548277 TNFRSF10BO14763 440 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 TGFB1I1O43294 461 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 TULP3O75386 442 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 TACC1O75410 805 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 OLFM2O95897 454 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 TNFRSF4P43489 277 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 SIM1P81133 766 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 RPL6Q02878 288 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 C10orf76Q5T2E6 689 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 HECTD3Q5T447 861 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 SCARA5Q6ZMJ2 495 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 TPGS1Q6ZTW0 290 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 DDX42Q86XP3 938 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 B3GALNT2Q8NCR0 500 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 ZNF507Q8TCN5 953 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 INTS4Q96HW7 963 aaKnown RBP12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 ELOVL4Q9GZR5 314 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 BLZF1Q9H2G9 400 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 SMYD3Q9H7B4 428 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 KIAA1586Q9HCI6 787 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 AGPAT3Q9NRZ7 376 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 GMIPQ9P107 970 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 EVLQ9UI08 416 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 KLK13Q9UKR3 277 aa12.69□□□□□ -0.38
TRAFD1-205ENST00000548277 A0A0A0MRY4 1105 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 E2F8A0AVK6 867 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 RTN3O95197 1032 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms