RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 MAPK13O15264 365 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 PMM2O15305 246 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 PHF2O75151 1096 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 AKAP3O75969 853 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 MTA2O94776 668 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 FAM13AO94988 1023 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 GCNT3O95395 438 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 C1QTNF9P0C862 333 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 MAPTP10636 758 aaKnown RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 HPDP32754 393 aaPredicted RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 LIMK1P53667 647 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 GALCP54803 685 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 NTHL1P78549 312 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 DR1Q01658 176 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 DHX9Q08211 1270 aaKnown RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 DSC1Q08554 894 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 IFT88Q13099 833 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 TCERG1LQ5VWI1 586 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 DUPD1Q68J44 220 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 LILRA6Q6PI73 481 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 UNQ6494/PRO21346Q6UXR6 183 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 PRR23BQ6ZRT6 265 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 TAOK1Q7L7X3 1001 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 GRASPQ7Z6J2 395 aaPredicted RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 CPLX4Q7Z7G2 160 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 PALB2Q86YC2 1186 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 CELF5Q8N6W0 485 aaKnown RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 CCDC197Q8NCU1 140 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 CCHCR1Q8TD31 782 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 MAIP1Q8WWC4 291 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 CHMP6Q96FZ7 201 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 SGSM3Q96HU1 749 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 SEC16BQ96JE7 1060 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 B3GALT6Q96L58 329 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 GCOM2Q9BZD3 368 aaPredicted RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 ROPN1BQ9BZX4 212 aaPredicted RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 DDX47Q9H0S4 455 aaKnown RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 PABPC3Q9H361 631 aaKnown RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 RSAD1Q9HA92 442 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 ROPN1Q9HAT0 212 aaPredicted RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 CHST7Q9NS84 486 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 TBC1D7Q9P0N9 293 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 PCYOX1Q9UHG3 505 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 FBXW11Q9UKB1 542 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 PACSIN2Q9UNF0 486 aaPredicted RBP10.34□□□□□ -0.75
CDK4-205ENST00000547853 SSX2IPQ9Y2D8 614 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 PCDHB2Q9Y5E7 798 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
CDK4-205ENST00000547853 A0A087WZ62 844 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 A0A1B0GUA9 196 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 DDX3YO15523 660 aaKnown RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 DAPK3O43293 454 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 POMCP01189 267 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 FGGP02679 453 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 PSAPP07602 524 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 SPATA31C1P0DKV0 1188 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 TNFAIP3P21580 790 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 MAN1A1P33908 653 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 FMO5P49326 533 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 DNA2P51530 1060 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 ZNF131P52739 623 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 MRPS25P82663 173 aaKnown RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 MAPK7Q13164 816 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 XRCC4Q13426 336 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 TARBP2Q15633 366 aaKnown RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 SNCBQ16143 134 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 SKIDA1Q1XH10 827 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 ANKRD20A8PQ5CZ79 823 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 ERMARDQ5T6L9 678 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 SEL1L2Q5TEA6 688 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 FBXW10Q5XX13 1052 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 TTC19Q6DKK2 380 aaPredicted RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 CEP128Q6ZU80 1094 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 SYDE1Q6ZW31 735 aaPredicted RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 COLGALT2Q8IYK4 626 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 GBP7Q8N8V2 638 aaPredicted RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 KDF1Q8NAX2 398 aaPredicted RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 PGBD4Q96DM1 585 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 XPO6Q96QU8 1125 aaKnown RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 FDXACB1Q9BRP7 624 aaPredicted RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 SYT11Q9BT88 431 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 IER2Q9BTL4 223 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 FGFBP2Q9BYJ0 223 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 CENPHQ9H3R5 247 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 PARVGQ9HBI0 331 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 PPANQ9NQ55 473 aaKnown RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 APEX2Q9UBZ4 518 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 AMACRQ9UHK6 382 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 NOVA2Q9UNW9 492 aaKnown RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 USP20Q9Y2K6 914 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 PCDHA10Q9Y5I2 948 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 KIF26AQ9ULI4 1882 aaPredicted RBP10.33□□□□□ -0.76
CDK4-205ENST00000547853 LAMA5O15230 3695 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 BPTFQ12830 3046 aa10.33□□□□□ -0.76
CDK4-205ENST00000547853 IGKV6-21A0A0C4DH24 114 aa10.32□□□□□ -0.76
CDK4-205ENST00000547853 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
CDK4-205ENST00000547853 TTI1O43156 1089 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms