RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 GGT7Q9UJ14 662 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 PPEF2O14830 753 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 TYROBPO43914 113 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 CA4P22748 312 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 PDK2Q15119 407 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 DGKDQ16760 1214 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 GALNTL6Q49A17 601 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 BOLA3Q53S33 107 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 ADGRD1Q6QNK2 874 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 DPP9Q86TI2 863 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 PALM2Q8IXS6 379 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 OR6J1Q8NGC5 347 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.2■□□□□ 0.18
BRF1-212ENST00000547562 MS4A4AQ96JQ5 239 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 SNX27Q96L92 541 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 PAFAH2Q99487 392 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 ADAMTS10Q9H324 1103 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 FAM49BQ9NUQ9 324 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 MORF4L1Q9UBU8 362 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 SETSIPP0DME0 302 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 TSHRP16473 764 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 YBX3P16989 372 aaKnown RBP eCLIP16.2■□□□□ 0.18
BRF1-212ENST00000547562 IL4RP24394 825 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 GCLCP48506 637 aaPredicted RBP16.2■□□□□ 0.18
BRF1-212ENST00000547562 SLC6A3Q01959 620 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 MTM1Q13496 603 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 SLC27A1Q6PCB7 646 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 RGS9BPQ6ZS82 235 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 APBB1IPQ7Z5R6 666 aaPredicted RBP16.2■□□□□ 0.18
BRF1-212ENST00000547562 TMEM110Q86TL2 294 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 FAM172AQ8WUF8 416 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 MAML3Q96JK9 1138 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 ADAM33Q9BZ11 813 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 SSU72Q9NP77 194 aaKnown RBP16.2■□□□□ 0.18
BRF1-212ENST00000547562 SETD4Q9NVD3 440 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 NME7Q9Y5B8 376 aa16.2■□□□□ 0.18
BRF1-212ENST00000547562 H7C0C1 242 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 SDC4P31431 198 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 ATP5OP48047 213 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 TMEM62Q0P6H9 643 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 ZBTB6Q15916 424 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 PDK4Q16654 411 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 SCYL2Q6P3W7 929 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 C1orf228Q6PIY5 440 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 FAM47EQ6ZV65 393 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 GPR142Q7Z601 462 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 PLD5Q8N7P1 536 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 SLC35F5Q8WV83 523 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 TEKT4Q8WW24 435 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 USP6NLQ92738 828 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 KHSRPQ92945 711 aaKnown RBP eCLIP16.19■□□□□ 0.18
BRF1-212ENST00000547562 NGRNQ9NPE2 291 aaKnown RBP16.19■□□□□ 0.18
BRF1-212ENST00000547562 KLHL14Q9P2G3 628 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 TUBGCP4Q9UGJ1 667 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 GRID1Q9ULK0 1009 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 CCL15-CCL14A0A0B4J2E2 113 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 KRT4P19013 534 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 MNAT1P51948 309 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 ACVR2BQ13705 512 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 KCNJ11Q14654 390 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 SLC1A5Q15758 541 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 CCL15Q16663 113 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 ZC3H12AQ5D1E8 599 aaKnown RBP16.19■□□□□ 0.18
BRF1-212ENST00000547562 RNF43Q68DV7 783 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 CATSPER4Q7RTX7 472 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 SESTD1Q86VW0 696 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 SCUBE3Q8IX30 993 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 PARP9Q8IXQ6 854 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 LRRC52Q8N7C0 313 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 RMDN2Q96LZ7 410 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 TBCBQ99426 244 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 EIF2AQ9BY44 585 aaKnown RBP16.19■□□□□ 0.18
BRF1-212ENST00000547562 GCOM2Q9BZD3 368 aaPredicted RBP16.19■□□□□ 0.18
BRF1-212ENST00000547562 FAM49AQ9H0Q0 323 aaPredicted RBP16.19■□□□□ 0.18
BRF1-212ENST00000547562 ABHD16BQ9H3Z7 469 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 USP29Q9HBJ7 922 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 RXFP1Q9HBX9 757 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 HESX1Q9UBX0 185 aa16.19■□□□□ 0.18
BRF1-212ENST00000547562 RRN3P2A6NIE6 340 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 PAPSS1O43252 624 aaPredicted RBP16.18■□□□□ 0.18
BRF1-212ENST00000547562 ATP2A2P16615 1042 aaKnown RBP16.18■□□□□ 0.18
BRF1-212ENST00000547562 YARSP54577 528 aaKnown RBP16.18■□□□□ 0.18
BRF1-212ENST00000547562 DNAJC3Q13217 504 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 GRB14Q14449 540 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 VSIG1Q86XK7 387 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 FITM2Q8N6M3 262 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 CCDC63Q8NA47 563 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 BEST2Q8NFU1 509 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 C18orf25Q96B23 403 aaPredicted RBP16.18■□□□□ 0.18
BRF1-212ENST00000547562 PCDH18Q9HCL0 1135 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 GPATCH2LQ9NWQ4 482 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 CHMP2BQ9UQN3 213 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 STARD13Q9Y3M8 1113 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 CFAP73A6NFT4 308 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 CHADO15335 359 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 GPR32O75388 356 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 GABBR2O75899 941 aa16.18■□□□□ 0.18
BRF1-212ENST00000547562 PIAS1O75925 651 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms