RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 LCP1P13796 627 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 GJA1P17302 382 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 CEBPBP17676 345 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 TNFAIP3P21580 790 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 SP100P23497 879 aaPredicted RBP14.49□□□□□ -0.09
PTCH1-213ENST00000546820 CASP14P31944 242 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 RGS7P49802 495 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 KLHL30Q0D2K2 578 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 SNX30Q5VWJ9 437 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 PM20D1Q6GTS8 502 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 MTSS1LQ765P7 747 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 GPRIN1Q7Z2K8 1008 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 CCDC186Q7Z3E2 898 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 TMEM150AQ86TG1 271 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 PASD1Q8IV76 773 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 NPAS3Q8IXF0 933 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 DDX1Q92499 740 aaKnown RBP14.49□□□□□ -0.09
PTCH1-213ENST00000546820 NXPE3Q969Y0 559 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 MYADMQ96S97 322 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 AGPAT1Q99943 283 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 SLC4A5Q9BY07 1137 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 ZNHIT6Q9NWK9 470 aaKnown RBP14.49□□□□□ -0.09
PTCH1-213ENST00000546820 DOCK6Q96HP0 2047 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 TRAV19A0A0A6YYK7 116 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 C2CD4DB7Z1M9 353 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 TULP2O00295 520 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 SART1O43290 800 aaKnown RBP14.48□□□□□ -0.09
PTCH1-213ENST00000546820 AP5Z1O43299 807 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 GYPCP04921 128 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 CFHP08603 1231 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 RALAP11233 206 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 HDCP19113 662 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 WEE1P30291 646 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 AVPR1AP37288 418 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 CYP4F8P98187 520 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 ZP2Q05996 745 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 ADIGQ0VDE8 80 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 HECTD3Q5T447 861 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 TADA2BQ86TJ2 420 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 TMEM110Q86TL2 294 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 DRC7Q8IY82 874 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 SCML4Q8N228 414 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 MAB21L3Q8N8X9 362 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 OR8K1Q8NGG5 319 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 IRGQQ8WZA9 623 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 GOLGA1Q92805 767 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 E2F7Q96AV8 911 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 PPP1R13BQ96KQ4 1090 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 CDK5RAP1Q96SZ6 601 aaKnown RBP14.48□□□□□ -0.09
PTCH1-213ENST00000546820 ULBP1Q9BZM6 244 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 SYNCQ9H7C4 482 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 TRPC7Q9HCX4 862 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 SEPT11Q9NVA2 429 aaKnown RBP14.48□□□□□ -0.09
PTCH1-213ENST00000546820 GMIPQ9P107 970 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 IGSF9Q9P2J2 1179 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 NOCTQ9UK39 431 aaKnown RBP14.48□□□□□ -0.09
PTCH1-213ENST00000546820 NOTCH4Q99466 2003 aa14.48□□□□□ -0.09
PTCH1-213ENST00000546820 GREB1Q4ZG55 1949 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 C19orf67A6NJJ6 358 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 DPYSL4O14531 572 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 SERPING1P05155 500 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 ZDHHC11BP0C7U3 371 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 CDH5P33151 784 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-213ENST00000546820 PRKCIP41743 596 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 RPL34P49207 117 aaKnown RBP14.47□□□□□ -0.09
PTCH1-213ENST00000546820 TUBP50607 506 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 PDCLQ13371 301 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 TXNDC8Q6A555 127 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 PPP1R2P3Q6NXS1 205 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 TMC6Q7Z403 805 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 VPS36Q86VN1 386 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 ERICH1Q86X53 443 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 CNGA4Q8IV77 575 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 SCUBE3Q8IX30 993 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 CMTM8Q8IZV2 173 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 WDTC1Q8N5D0 677 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 ZSCAN18Q8TBC5 510 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-213ENST00000546820 IPO4Q8TEX9 1081 aaKnown RBP14.47□□□□□ -0.09
PTCH1-213ENST00000546820 SLC20A1Q8WUM9 679 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 SMARCD2Q92925 531 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 TRIM62Q9BVG3 475 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 SLC46A2Q9BY10 475 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 NACA2Q9H009 215 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 ZFP14Q9HCL3 533 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 CLIC5Q9NZA1 410 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 LIMD1Q9UGP4 676 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 NAGPAQ9UK23 515 aa14.47□□□□□ -0.09
PTCH1-213ENST00000546820 A0A1W2PQH9 124 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 GOLGA6L3A6NEY3 463 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 AKR1B15C9JRZ8 316 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-213ENST00000546820 CYP1A1P04798 512 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-213ENST00000546820 CKMP06732 381 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 CHRNB2P17787 502 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 ATP5C1P36542 298 aaKnown RBP14.46□□□□□ -0.09
PTCH1-213ENST00000546820 YWHAGP61981 247 aaKnown RBP eCLIP14.46□□□□□ -0.09
PTCH1-213ENST00000546820 FMO1Q01740 532 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 FAM78AQ5JUQ0 283 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 BTBD8Q5XKL5 378 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 ZDHHC17Q8IUH5 632 aa14.46□□□□□ -0.09
PTCH1-213ENST00000546820 GPIHBP1Q8IV16 184 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms