RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 CNTNAP2Q9UHC6 1331 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 hCG_1642624A0A1W2PR95 340 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 FAM221BA6H8Z2 402 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 TMEM150BA6NC51 233 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 CTIFO43310 598 aaKnown RBP7.31□□□□□ -1.24
CCDC60-205ENST00000546345 EXTL3O43909 919 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 RPP40O75818 363 aaKnown RBP7.31□□□□□ -1.24
CCDC60-205ENST00000546345 CAVIN2O95810 425 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ALDH2P05091 517 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 PLA2G2AP14555 144 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 SFPQP23246 707 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC60-205ENST00000546345 CCNE1P24864 410 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 KIF5BP33176 963 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 MLH1P40692 756 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 SCNN1GP51170 649 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ANTXR2P58335 489 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ANAPC15P60006 121 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 PRKCEQ02156 737 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ARID5AQ03989 594 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ATMQ13315 3056 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 TARBP2Q15633 366 aaKnown RBP7.31□□□□□ -1.24
CCDC60-205ENST00000546345 FAM78AQ5JUQ0 283 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 PPM1LQ5SGD2 360 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 MIS18BP1Q6P0N0 1132 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 TP53INP2Q8IXH6 220 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 CKAP2LQ8IYA6 745 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 GSTCDQ8NEC7 633 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 DEFB124Q8NES8 71 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 CRYGNQ8WXF5 182 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 RABGGTAQ92696 567 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 RSPRY1Q96DX4 576 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 MCRS1Q96EZ8 462 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ZC3H10Q96K80 434 aaKnown RBP7.31□□□□□ -1.24
CCDC60-205ENST00000546345 PAAF1Q9BRP4 392 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ANO3Q9BYT9 981 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 KRT23Q9C075 422 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 TSPY26PQ9H489 355 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 BRD9Q9H8M2 597 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 TRPV5Q9NQA5 729 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 CALCOCO1Q9P1Z2 691 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ANKFY1Q9P2R3 1169 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 ATP6V1DQ9Y5K8 247 aa7.31□□□□□ -1.24
CCDC60-205ENST00000546345 TMEM131Q92545 1883 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 DOPEY2Q9Y3R5 2298 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 IGKV6-21A0A0C4DH24 114 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 PATE3B3GLJ2 98 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 H3BS24 57 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 ADAMTS3O15072 1205 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 PTMAP06454 111 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 RHOP08100 348 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 CD8BP10966 210 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 HOXA11P31270 313 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 SREBF1P36956 1147 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 CCR2P41597 374 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 PDE1AP54750 535 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 GP2P55259 537 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 NOLC1Q14978 699 aaKnown RBP eCLIP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 PLK5Q496M5 336 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 DNTTIP2Q5QJE6 756 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 LIN9Q5TKA1 542 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 LARP1BQ659C4 914 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 CACNA2D4Q7Z3S7 1137 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 THAP5Q7Z6K1 395 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 KSR1Q8IVT5 923 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 SRBD1Q8N5C6 995 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 IPO4Q8TEX9 1081 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 ANKRD7Q92527 254 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 UBE2FQ969M7 185 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 TCEAL4Q96EI5 215 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 RRP36Q96EU6 259 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 SLC6A18Q96N87 628 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 GAD1Q99259 594 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 GCOM2Q9BZD3 368 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 DUSP15Q9H1R2 295 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 MINDY3Q9H8M7 445 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 IFT122Q9HBG6 1241 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 SEMA3GQ9NS98 782 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 POLR3BQ9NW08 1133 aaPredicted RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 GDE1Q9NZC3 331 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 CGNQ9P2M7 1197 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 GABBR1Q9UBS5 961 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 PAXBP1Q9Y5B6 917 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 MYO18AQ92614 2054 aaKnown RBP7.3□□□□□ -1.24
CCDC60-205ENST00000546345 MYLKQ15746 1914 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 ANAPC1Q9H1A4 1944 aa7.3□□□□□ -1.24
CCDC60-205ENST00000546345 SPAARA0A1B0GVQ0 90 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 BCLAF3A2AJT9 711 aaKnown RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 ARL5CA6NH57 179 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 SLC38A8A6NNN8 435 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 IPO5O00410 1097 aaKnown RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 MOSPD3O75425 235 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 STBD1O95210 358 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 CDK11BP21127 795 aaKnown RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 TMOD1P28289 359 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 GDI1P31150 447 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 DNAJA1P31689 397 aaKnown RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 SCAPQ12770 1279 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 IMMTQ16891 758 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms