RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TYMPP19971 482 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 ATICP31939 592 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 CA8P35219 290 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 ASPAP45381 313 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 GRIA4P48058 902 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 COPB1P53618 953 aaKnown RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 DSG1Q02413 1049 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 CETN1Q12798 172 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 CAMK1Q14012 370 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 SMC1AQ14683 1233 aaKnown RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 PSMD5Q16401 504 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 PTPROQ16827 1216 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 VWA3BQ502W6 1294 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 ZNF667Q5HYK9 610 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 SPOPLQ6IQ16 392 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 ZNF280DQ6N043 979 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 KIAA1841Q6NSI8 718 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 DSTYKQ6XUX3 929 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 ADGRF2Q8IZF7 708 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 Q8N3U1 123 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 PDCL2Q8N4E4 241 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 DEFB123Q8N688 67 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 TOP6BLQ8N6T0 577 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 CCDC150Q8NCX0 1101 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 APPL2Q8NEU8 664 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 RIN2Q8WYP3 895 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 TAF4BQ92750 862 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 SEMA4DQ92854 862 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 CCDC74AQ96AQ1 378 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 MRPL38Q96DV4 380 aaKnown RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 PI4K2AQ9BTU6 479 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 TTPALQ9BTX7 342 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 CLEC4MQ9H2X3 399 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 NDST4Q9H3R1 872 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 SMYD3Q9H7B4 428 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 NGRNQ9NPE2 291 aaKnown RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 CHST7Q9NS84 486 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 RAB20Q9NX57 234 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 GDAP2Q9NXN4 497 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 LIMA1Q9UHB6 759 aaKnown RBP6.77□□□□□ -1.33
PRKDC-211ENST00000546304 DCTN4Q9UJW0 460 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 DSEQ9UL01 958 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 L1RE1Q9UN81 338 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 COQ4Q9Y3A0 265 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 PCDHGC5Q9Y5F6 944 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 SNX9Q9Y5X1 595 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 MYO16Q9Y6X6 1858 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 C2orf16Q68DN1 1984 aa6.77□□□□□ -1.33
PRKDC-211ENST00000546304 VCANP13611 3396 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 GTPBP10A4D1E9 387 aaKnown RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 CYB561D2O14569 222 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 HUS1O60921 280 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 CST3P01034 146 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 CYP11A1P05108 521 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 CDK11BP21127 795 aaKnown RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 RAP1GAPP47736 663 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 NDUFV1P49821 464 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 ERVFC1P60507 584 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 CREMQ03060 361 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 YWHAHQ04917 246 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 BMS1Q14692 1282 aaKnown RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 EXOC3L4Q17RC7 722 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 SOWAHAQ2M3V2 549 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 SPRED3Q2MJR0 410 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 SGSM1Q2NKQ1 1148 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 WDR72Q3MJ13 1102 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 FKBP15Q5T1M5 1219 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 WSCD1Q658N2 575 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 OVOS1Q6IE37 1185 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 PDXDC1Q6P996 788 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 TRIM65Q6PJ69 517 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 PRSS55Q6UWB4 352 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 GBP6Q6ZN66 633 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 ANKS3Q6ZW76 656 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 TAS1R1Q7RTX1 841 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 APTXQ7Z2E3 356 aaKnown RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 CEP57Q86XR8 500 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 GPR65Q8IYL9 337 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 ARMC10Q8N2F6 343 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 TMEM86AQ8N2M4 240 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 SPATA18Q8TC71 538 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 KBTBD7Q8WVZ9 684 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 AUTS2Q8WXX7 1259 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 PPP2R3CQ969Q6 453 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 ELMO3Q96BJ8 720 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 GUCD1Q96NT3 240 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 NT5C1BQ96P26 610 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 MMS19Q96T76 1030 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 CRACR2AQ9BSW2 395 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 ANP32EQ9BTT0 268 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 INTS2Q9H0H0 1204 aaKnown RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 VPS16Q9H269 839 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 NSUN3Q9H649 340 aaKnown RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 APOBEC3GQ9HC16 384 aaKnown RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 NPHS2Q9NP85 383 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 MRPL17Q9NRX2 175 aaKnown RBP6.76□□□□□ -1.33
PRKDC-211ENST00000546304 MTRRQ9UBK8 725 aa6.76□□□□□ -1.33
PRKDC-211ENST00000546304 TIMM13Q9Y5L4 95 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms