RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 L3MBTL1Q9Y468 752 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 CTDP1Q9Y5B0 961 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-225ENST00000545920 PCDHB4Q9Y5E5 795 aa6.77□□□□□ -1.33
SNHG1-225ENST00000545920 TCRBV5S1A1TA0A578 114 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CCDC189A1A4V9 331 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 H0YIN7 160 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CHADO15335 359 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 NEBLO76041 1014 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 HAUS5O94927 633 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 GH1P01241 217 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 RPSAP08865 295 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 MYL4P12829 197 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 PECAM1P16284 738 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CNTFP26441 200 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 GCAP28676 217 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CDKN2BP42772 138 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 RAP1GDS1P52306 607 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 EFNA5P52803 228 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 RAD23BP54727 409 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 IRX4P78413 519 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 MRPS9P82933 396 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 XIAPP98170 497 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CDK16Q00536 496 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 SLC18A2Q05940 514 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 GPS1Q13098 491 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 DNAJC3Q13217 504 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 ORC1Q13415 861 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 TFDP2Q14188 446 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 DLGAP5Q15398 846 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 TRMT5Q32P41 509 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 GNPTABQ3T906 1256 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 DNAL1Q4LDG9 190 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 FAM47CQ5HY64 1035 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 ATG16L1Q676U5 607 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CYP4F22Q6NT55 531 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 TMEM214Q6NUQ4 689 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 SLC39A4Q6P5W5 647 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 C4orf50Q6ZRC1 276 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CYS1Q717R9 158 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 ADGRG6Q86SQ4 1221 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 VSIG10LQ86VR7 867 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 LONP2Q86WA8 852 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 WDR49Q8IV35 697 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 MFN1Q8IWA4 741 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 DHX37Q8IY37 1157 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 SPICE1Q8N0Z3 855 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 BANPQ8N9N5 519 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 AGBL3Q8NEM8 1001 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 PIP4K2CQ8TBX8 421 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 ACER1Q8TDN7 264 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 MICAL1Q8TDZ2 1067 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CPA5Q8WXQ8 436 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 DNAJC9Q8WXX5 260 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 ATG4AQ8WYN0 398 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 PRCCQ92733 491 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 USP6NLQ92738 828 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 UTP4Q969X6 686 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 SPDL1Q96EA4 605 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 BICD1Q96G01 975 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 APOPT1Q96IL0 206 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 NSL1Q96IY1 281 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CEP170P1Q96L14 293 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 C9orf72Q96LT7 481 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 C7orf26Q96N11 449 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 UIMC1Q96RL1 719 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 PDCD2LQ9BRP1 358 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 IKZF4Q9H2S9 585 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 VCX3BQ9H321 246 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 BCAS3Q9H6U6 928 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 TDRD3Q9H7E2 651 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 MANSC1Q9H8J5 431 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 DBNDD1Q9H9R9 158 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 GPAMQ9HCL2 828 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 CYP26B1Q9NR63 512 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 PXMP2Q9NR77 195 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 KCNK4Q9NYG8 393 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 IL1RAPL1Q9NZN1 696 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 PDP2Q9P2J9 529 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 STX18Q9P2W9 335 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF70Q9UC06 446 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 AGO2Q9UKV8 859 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 TRPC5Q9UL62 973 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 R3HDM2Q9Y2K5 976 aaKnown RBP6.76□□□□□ -1.33
SNHG1-225ENST00000545920 IKBKGQ9Y6K9 419 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 SSC5DA1L4H1 1573 aa6.76□□□□□ -1.33
SNHG1-225ENST00000545920 A0A0B4J269 797 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 GOLGA8IPA6NC78 632 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SIGLEC16A6NMB1 481 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 GOLGA8JA6NMD2 632 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 SPATA31C2B4DYI2 1134 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 I3L4J1 428 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 APOC4-APOC2K7ER74 178 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 GIPC1O14908 333 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 PLSCR1O15162 318 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 NVLO15381 856 aaKnown RBP6.75□□□□□ -1.33
SNHG1-225ENST00000545920 BIRC5O15392 142 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 FKBP6O75344 327 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 KRT37O76014 449 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 STBD1O95210 358 aa6.75□□□□□ -1.33
SNHG1-225ENST00000545920 ASS1P00966 412 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms