RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 CYP11B1P15538 503 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 RANBP1P43487 201 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 FCGRTP55899 365 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 PPP4CP60510 307 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 DENND5BQ6ZUT9 1274 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 FAM111AQ96PZ2 611 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 CLPBQ9H078 707 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 EXOSC4Q9NPD3 245 aaKnown RBP12.09□□□□□ -0.47
CIT-217ENST00000545913 SPATA31A6Q5VVP1 1343 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 SLCO1B7G3V0H7 640 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 THRAP10827 490 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 PKN2Q16513 984 aaKnown RBP12.09□□□□□ -0.47
CIT-217ENST00000545913 CACNA2D2Q9NY47 1150 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 LZTS1Q9Y250 596 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 CENPAP49450 140 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 SLC16A1P53985 500 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 CAMK2GQ13555 558 aaPredicted RBP12.09□□□□□ -0.47
CIT-217ENST00000545913 NCF4Q15080 339 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 GALNTL6Q49A17 601 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 ADGRF2Q8IZF7 708 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 ANKRD7Q92527 254 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 TUBGCP3Q96CW5 907 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 LRRC40Q9H9A6 602 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 NMRK2Q9NPI5 230 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 PAIP2BQ9ULR5 123 aaKnown RBP12.09□□□□□ -0.47
CIT-217ENST00000545913 SATB2Q9UPW6 733 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 LHX1P48742 406 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 RCN1Q15293 331 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 NLRP9Q7RTR0 991 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 MICU2Q8IYU8 434 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 EXD1Q8NHP7 514 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 V9GYQ6 96 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 VDRP11473 427 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 PRLRP16471 622 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 SREBF1P36956 1147 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 LUZP2Q86TE4 346 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 PRRG3Q9BZD7 231 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 RAD54BQ9Y620 910 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 KIDINS220Q9ULH0 1771 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 PTPRMP28827 1452 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 MPZL3Q6UWV2 235 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 USP49Q70CQ1 688 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 OTOAQ7RTW8 1153 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 KIF2BQ8N4N8 673 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 DNAJC7Q99615 494 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 RUSC1Q9BVN2 902 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 MROH8Q9H579 483 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 RUVBL2Q9Y230 463 aaKnown RBP12.09□□□□□ -0.47
CIT-217ENST00000545913 LMTK2Q8IWU2 1503 aa12.09□□□□□ -0.47
CIT-217ENST00000545913 SUPT7LO94864 414 aa12.08□□□□□ -0.47
CIT-217ENST00000545913 ALDH6A1Q02252 535 aaKnown RBP12.08□□□□□ -0.47
CIT-217ENST00000545913 CEP78Q5JTW2 689 aa12.08□□□□□ -0.47
CIT-217ENST00000545913 KDM7AQ6ZMT4 941 aa12.08□□□□□ -0.47
CIT-217ENST00000545913 DDI1Q8WTU0 396 aa12.08□□□□□ -0.47
CIT-217ENST00000545913 JADE3Q92613 823 aa12.08□□□□□ -0.47
CIT-217ENST00000545913 CNPY3Q9BT09 278 aa12.08□□□□□ -0.47
CIT-217ENST00000545913 A0A0A6YYK5 440 aaPredicted RBP12.08□□□□□ -0.48
CIT-217ENST00000545913 SLC37A4O43826 429 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 ANTXR2P58335 489 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 PTGISQ16647 500 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 CHMP1BQ7LBR1 199 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 SLC22A9Q8IVM8 553 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 CENPLQ8N0S6 344 aaPredicted RBP12.08□□□□□ -0.48
CIT-217ENST00000545913 ACTRT1Q8TDG2 376 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 RPRD1AQ96P16 312 aaPredicted RBP12.08□□□□□ -0.48
CIT-217ENST00000545913 CPS1P31327 1500 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 SERPINB5P36952 375 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 CCNG1P51959 295 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.48
CIT-217ENST00000545913 MTM1Q13496 603 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 LAYNQ6UX15 382 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 PDE4DIPQ5VU43 2346 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 AVPR1AP37288 418 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 DDX42Q86XP3 938 aaKnown RBP eCLIP12.08□□□□□ -0.48
CIT-217ENST00000545913 NOA1Q8NC60 698 aaKnown RBP12.08□□□□□ -0.48
CIT-217ENST00000545913 IL1RAPL1Q9NZN1 696 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 NTSR2O95665 410 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 CHRNB3Q05901 458 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 ERAP2Q6P179 960 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 MYO1HQ8N1T3 1032 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
CIT-217ENST00000545913 CTNNAL1Q9UBT7 734 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.08□□□□□ -0.48
CIT-217ENST00000545913 TK2O00142 265 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 THP07101 528 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 SOX11P35716 441 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 CSE1LP55060 971 aaKnown RBP12.08□□□□□ -0.48
CIT-217ENST00000545913 FAM117BQ6P1L5 589 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 CYP4Z1Q86W10 505 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 HERC6Q8IVU3 1022 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 PDP2Q9P2J9 529 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 LNPEPQ9UIQ6 1025 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 PHTF1Q9UMS5 762 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 EPB42P16452 691 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 PSMC3P17980 439 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 SERPINB3P29508 390 aa12.08□□□□□ -0.48
CIT-217ENST00000545913 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms