RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 HES5Q5TA89 166 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 CACHD1Q5VU97 1274 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 PLEKHA7Q6IQ23 1121 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ARMCX5Q6P1M9 558 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 PRMT9Q6P2P2 845 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 KLHL35Q6PF15 583 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 BNC2Q6ZN30 1099 aaPredicted RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 KIAA0907Q7Z7F0 614 aaPredicted RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF227Q86WZ6 799 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 CCDC36Q8IYA8 594 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 TCEAL8Q8IYN2 117 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 CLEC4FQ8N1N0 589 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 CSGALNACT2Q8N6G5 542 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SRFBP1Q8NEF9 429 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF461Q8TAF7 563 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SNX29Q8TEQ0 813 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SCFD2Q8WU76 684 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 TGFBRAP1Q8WUH2 860 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 PDCD6IPQ8WUM4 868 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 HEXDCQ8WVB3 486 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 VPS33AQ96AX1 596 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 FAM136AQ96C01 138 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 BIRC8Q96P09 236 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 FAM111AQ96PZ2 611 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 BCL7BQ9BQE9 202 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 PINK1Q9BXM7 581 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 PAIP1Q9H074 479 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 NAPBQ9H115 298 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 RC3H2Q9HBD1 1191 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF287Q9HBT7 754 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 C1orf112Q9NSG2 853 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 TXLNGQ9NUQ3 528 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 STK32BQ9NY57 414 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 TRPS1Q9UHF7 1281 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 IPO11Q9UI26 975 aaKnown RBP5.34□□□□□ -1.55
UBE4A-203ENST00000545354 ARHGAP26Q9UNA1 814 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 SNX6Q9UNH7 406 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 POLHQ9Y253 713 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 REREQ9P2R6 1566 aa5.34□□□□□ -1.55
UBE4A-203ENST00000545354 A0A1B0GTQ1 180 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 FAM221BA6H8Z2 402 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 GMNCA6NCL1 334 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 H7C0C1 242 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 PCDH17O14917 1159 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 DDX3YO15523 660 aaKnown RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SCO2O43819 266 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 CDC123O75794 336 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 ZNF202O95125 648 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 HSPA4LO95757 839 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 DNTTP04053 509 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 OCM2P0CE71 109 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 OCMP0CE72 109 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 HOXB8P17481 243 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 BMI1P35226 326 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 NUP62P37198 522 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 GP5P40197 560 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 COPB1P53618 953 aaKnown RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 NUP107P57740 925 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SMU1Q2TAY7 513 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 FAM209BQ5JX69 171 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SAPCD1Q5SSQ6 148 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 CNNM4Q6P4Q7 775 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 BLOC1S2Q6QNY1 142 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SPOCD1Q6ZMY3 1216 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 NUP54Q7Z3B4 507 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 UBE3BQ7Z3V4 1068 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 PRUNE1Q86TP1 453 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SCUBE3Q8IX30 993 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 FBXL16Q8N461 479 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 TMIEQ8NEW7 156 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 KCTD13Q8WZ19 329 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SLC25A36Q96CQ1 311 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 PRAM1Q96QH2 718 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SLC26A6Q9BXS9 759 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 GPR61Q9BZJ8 451 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 DCLK3Q9C098 648 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 GRIP2Q9C0E4 1043 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SNRKQ9NRH2 765 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 FAM114A2Q9NRY5 505 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 ETNK2Q9NVF9 386 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 KBTBD4Q9NVX7 518 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 EIF2B4Q9UI10 523 aaKnown RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 MBD1Q9UIS9 605 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 CPSF3Q9UKF6 684 aaKnown RBP5.33□□□□□ -1.56
UBE4A-203ENST00000545354 STX8Q9UNK0 236 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SLC12A4Q9UP95 1085 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 ENTPD4Q9Y227 616 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 TBC1D30Q9Y2I9 924 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 VPS8Q8N3P4 1428 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 NPHP3Q7Z494 1330 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 A0A1B0GVC2 190 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 SERTM1A2A2V5 107 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 TMEM210A6NLX4 147 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 CCT8L1PA6NM43 557 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 WRBO00258 174 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 TRAF5O00463 557 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 LAD1O00515 517 aa5.33□□□□□ -1.56
UBE4A-203ENST00000545354 CHMP2AO43633 222 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms