RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 FTCDO95954 541 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 IVLP07476 585 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 MYBL1P10243 752 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 RPL17P18621 184 aaKnown RBP7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 DNAJB1P25685 340 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 GBP1P32455 592 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 DSG1Q02413 1049 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 ELAVL2Q12926 359 aaKnown RBP7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 SLC39A12Q504Y0 691 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 OTUD1Q5VV17 481 aaPredicted RBP7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 LEKR1Q6ZMV7 388 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 FAM183BPQ6ZVS7 135 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 DDX53Q86TM3 631 aaKnown RBP7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 NT5DC3Q86UY8 548 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 ERICH1Q86X53 443 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 METTL23Q86XA0 190 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 ARFGAP1Q8N6T3 406 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 C3orf20Q8ND61 904 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 KCTD13Q8WZ19 329 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 CD101Q93033 1021 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 LRRC45Q96CN5 670 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 PLVAPQ9BX97 442 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 ZBP1Q9H171 429 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 SPG21Q9NZD8 308 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 VPS18Q9P253 973 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 UVRAGQ9P2Y5 699 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 DMGDHQ9UI17 866 aaKnown RBP7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 YBX2Q9Y2T7 364 aaKnown RBP7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 BACE2Q9Y5Z0 518 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 SZT2Q5T011 3432 aa7.36□□□□□ -1.23
HMGCS2-204ENST00000544913 GREB1Q4ZG55 1949 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 WDR27A2RRH5 827 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 MTMR11A4FU01 709 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 OR6C75A6NL08 312 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PIK3R2O00459 728 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CEP104O60308 925 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 HEXIM1O94992 359 aaKnown RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CALB1P05937 261 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 FYNP06241 537 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 TCF4P15884 667 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 BDNFP23560 247 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CYP2F1P24903 491 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 MARCKSL1P49006 195 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 GPR15P49685 360 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PGFP49763 221 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 NDUFV1P49821 464 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 GPR17Q13304 367 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CTXN3Q4LDR2 81 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 RAB6CQ53S08 254 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 SPDYCQ5MJ68 293 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 DAB2IPQ5VWQ8 1189 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ZNF280DQ6N043 979 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 C11orf63Q6NUN7 778 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 RNF19BQ6ZMZ0 732 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 SND1Q7KZF4 910 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 UBL4BQ8N7F7 174 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 KLHL23Q8NBE8 558 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ATAD1Q8NBU5 361 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ZNF564Q8TBZ8 553 aaPredicted RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 AUTS2Q8WXX7 1259 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 NDRG1Q92597 394 aaKnown RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 HSFY1Q96LI6 401 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 C11orf84Q9BUA3 381 aaPredicted RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 RAB6CQ9H0N0 254 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PRO3102Q9H379 93 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CYLDQ9NQC7 956 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PRDM4Q9UKN5 801 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PLXNA3P51805 1871 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ARHGEF37A1IGU5 675 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 SIGLEC16A6NMB1 481 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 C5orf67F2Z3F1 127 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 F8VP50 259 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 H3BQF6 201 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 DDX3YO15523 660 aaKnown RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 AP1G2O75843 785 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 FGF18O76093 207 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 SYF2O95926 243 aaKnown RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 FAM200BP0CF97 657 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 RFC1P35251 1148 aaPredicted RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 FLT3P36888 993 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 MAP3K7CLP57077 242 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ROR1Q01973 937 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 MTMR3Q13615 1198 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ZNF268Q14587 947 aaPredicted RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PSMD5Q16401 504 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 PTPROQ16827 1216 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 USP41Q3LFD5 358 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 DCAF12L1Q5VU92 463 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 HFE2Q6ZVN8 426 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ANKS3Q6ZW76 656 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CYP4V2Q6ZWL3 525 aaPredicted RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 SLC26A9Q7LBE3 791 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 BNIPLQ7Z465 357 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 CEP57Q86XR8 500 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 FIBCD1Q8N539 461 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 STKLD1Q8NE28 680 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 RIN2Q8WYP3 895 aaPredicted RBP7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 ALG3Q92685 438 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 KRT35Q92764 455 aa7.35□□□□□ -1.23
HMGCS2-204ENST00000544913 C18orf8Q96DM3 657 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms