RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 TLE6Q9H808 572 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 KAT14Q9H8E8 782 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 JMJD4Q9H9V9 463 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 CARS2Q9HA77 564 aaKnown RBP6.87□□□□□ -1.31
CPSF7-222ENST00000544585 IFT122Q9HBG6 1241 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 EBF1Q9UH73 591 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 DPP7Q9UHL4 492 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 VAV3Q9UKW4 847 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 DMTF1Q9Y222 760 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 USP15Q9Y4E8 981 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-222ENST00000544585 ASB1Q9Y576 335 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 PTPRSQ13332 1948 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 CACNA1HO95180 2353 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 ZDBF2Q9HCK1 2354 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 MYH7P12883 1935 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 TANC1Q9C0D5 1861 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 GCOM1H8Y6P7 765 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 ZNF213O14771 459 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 TUSC2O75896 110 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 ZGLP1P0C6A0 271 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 POLR2MP0CAP2 368 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 FOSL1P15407 271 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 PRKCAP17252 672 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 HOXB8P17481 243 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 UBA1P22314 1058 aaKnown RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 TRAPPC10P48553 1259 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 VCPP55072 806 aaKnown RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 LGALS4P56470 323 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 BCAR1P56945 870 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 GRIN1Q05586 938 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 ZBTB41Q5SVQ8 909 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 PRAMEF9Q5VWM5 478 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 MCTP2Q6DN12 878 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 ERAP2Q6P179 960 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 DARS2Q6PI48 645 aaKnown RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 RBM23Q86U06 439 aaKnown RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 UBALD2Q8IYN6 164 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 GIMAP8Q8ND71 665 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 ATP8B4Q8TF62 1192 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 SUSD6Q92537 303 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 NKD2Q969F2 451 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 NEK1Q96PY6 1258 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 SENP7Q9BQF6 1050 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 TMEM60Q9H2L4 133 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 ADAMTS10Q9H324 1103 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 CPVLQ9H3G5 476 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 SLAMF8Q9P0V8 285 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 ACSL6Q9UKU0 697 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 PCDHA1Q9Y5I3 950 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 NUMBLQ9Y6R0 609 aa6.86□□□□□ -1.31
CPSF7-222ENST00000544585 RIF1Q5UIP0 2472 aaKnown RBP6.86□□□□□ -1.31
CPSF7-222ENST00000544585 ZFHX2Q9C0A1 2572 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-222ENST00000544585 ZMYM6O95789 1325 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 CCDC171Q6TFL3 1326 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 COL4A6Q14031 1691 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 RRN3P2A6NIE6 340 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 GOLGA6L22H0YM25 854 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 ZBTB5O15062 677 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 MSL3P1P0C860 447 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 SETSIPP0DME0 302 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 GHRP10912 638 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 FSTP19883 344 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 MX1P20591 662 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-222ENST00000544585 DNAJB1P25685 340 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 CDK17Q00537 523 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 ALDH6A1Q02252 535 aaKnown RBP6.85□□□□□ -1.31
CPSF7-222ENST00000544585 CHRNEQ04844 493 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 ADCY2Q08462 1091 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 STK3Q13188 491 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 SPIDRQ14159 915 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 LPIN1Q14693 890 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 FBXO47Q5MNV8 452 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 ASCL5Q7RTU5 278 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 MILR1Q7Z6M3 343 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 ADGRD2Q7Z7M1 963 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 RTN4RL1Q86UN2 441 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-222ENST00000544585 SPPL2CQ8IUH8 684 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 CILP2Q8IUL8 1156 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 NME8Q8N427 588 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 PRR18Q8N4B5 295 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 NETO2Q8NC67 525 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 FOXRED1Q96CU9 486 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-222ENST00000544585 MISP3Q96FF7 219 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 GPR20Q99678 358 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 NAP1L4Q99733 375 aaKnown RBP6.85□□□□□ -1.31
CPSF7-222ENST00000544585 ACE2Q9BYF1 805 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-222ENST00000544585 NR2E1Q9Y466 385 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 PCDHGB6Q9Y5F9 930 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 LCTP09848 1927 aa6.85□□□□□ -1.31
CPSF7-222ENST00000544585 COL4A4P53420 1690 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-222ENST00000544585 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-222ENST00000544585 PRR23AA6NEV1 266 aa6.84□□□□□ -1.31
CPSF7-222ENST00000544585 KLRF2D3W0D1 207 aa6.84□□□□□ -1.31
CPSF7-222ENST00000544585 PER2O15055 1255 aa6.84□□□□□ -1.31
CPSF7-222ENST00000544585 FIBPO43427 364 aa6.84□□□□□ -1.31
CPSF7-222ENST00000544585 UBXN7O94888 489 aa6.84□□□□□ -1.31
CPSF7-222ENST00000544585 GLI4P10075 376 aa6.84□□□□□ -1.31
CPSF7-222ENST00000544585 HOXA13P31271 388 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-222ENST00000544585 CLCN5P51795 746 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms