RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 TP53INP2Q8IXH6 220 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 AGGF1Q8N302 714 aaeCLIP16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 CXorf38Q8TB03 319 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 ADAM32Q8TC27 787 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 PAFAH2Q99487 392 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 C16orf70Q9BSU1 422 aa16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 ZNF395Q9H8N7 513 aaPredicted RBP16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 TIMM13Q9Y5L4 95 aaPredicted RBP16.48■□□□□ 0.23
SNRNP70-203ENST00000544278 CCDC195A0A1B0GUA6 201 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 MEIS3P2A8K0S8 358 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 BTBD19C9JJ37 291 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 KBTBD13C9JR72 458 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 MCF2LO15068 1137 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 PRPSAP2O60256 369 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 SNAI1O95863 264 aaPredicted RBP16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 PFKMP08237 780 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 HIC1Q14526 733 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 MTHFD1LQ6UB35 978 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 MAMDC4Q6UXC1 1216 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 ECHDC2Q86YB7 292 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 ANKLE1Q8NAG6 615 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 FBXO41Q8TF61 875 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 FAM149B1Q96BN6 582 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 CENPTQ96BT3 561 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 FAF2Q96CS3 445 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 SMC6Q96SB8 1091 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 PCDHGC3Q9UN70 934 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 PPP2R3BQ9Y5P8 575 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 TARSP26639 723 aaKnown RBP16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 GBE1Q04446 702 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 STAT4Q14765 748 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 CCL15Q16663 113 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 ACCSLQ4AC99 568 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 HHATQ5VTY9 493 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 TMEM40Q8WWA1 233 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 P3H4Q92791 437 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 BCO2Q9BYV7 579 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 NPHS2Q9NP85 383 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 MAD1L1Q9Y6D9 718 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 BRCA1P38398 1863 aaKnown RBP16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 RASSF9O75901 435 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 KBTBD12Q3ZCT8 623 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 MARCH8Q5T0T0 291 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 ARMC3Q5W041 872 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 SYDE1Q6ZW31 735 aaPredicted RBP16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 FAM131BQ86XD5 332 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 PPM1NQ8N819 430 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 DNAJB3Q8WWF6 145 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 TTC17Q96AE7 1141 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 NSRP1Q9H0G5 558 aaKnown RBP16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 ETNK2Q9NVF9 386 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
SNRNP70-203ENST00000544278 A8MXQ7 604 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 MED7O43513 233 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 GPD1P21695 349 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 AFF1P51825 1210 aaKnown RBP16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 CCDC14Q49A88 953 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 SPNS2Q8IVW8 549 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 ERP27Q96DN0 273 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 PCDH9Q9HC56 1237 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 CCDC78A2IDD5 438 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 KRT7P08729 469 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 EZRP15311 586 aaKnown RBP16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 DPYSL3Q14195 570 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 PREPLQ4J6C6 727 aaPredicted RBP16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 BBS12Q6ZW61 710 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 SPATS2Q86XZ4 545 aaKnown RBP16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 PARP9Q8IXQ6 854 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 OR6J1Q8NGC5 347 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 TCP10LQ8TDR4 215 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 PTPRN2Q92932 1015 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 MECRQ9BV79 373 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 SLC13A1Q9BZW2 595 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 UBN1Q9NPG3 1134 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 RABGEF1Q9UJ41 708 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
SNRNP70-203ENST00000544278 CXCL11O14625 94 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 CBX6O95503 412 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 AP3M2P53677 418 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 NCALDP61601 193 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 CAV1Q03135 178 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 SNCBQ16143 134 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 SEPT7Q16181 437 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 PAN2Q504Q3 1202 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 CYP4V2Q6ZWL3 525 aaPredicted RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 YTHDF3Q7Z739 585 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 KLHL29Q96CT2 875 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 PRR11Q96HE9 360 aaPredicted RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 SNRNP25Q9BV90 132 aaKnown RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 PHTF1Q9UMS5 762 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 NUMBLQ9Y6R0 609 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 CXorf49A8MYA2 514 aaPredicted RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 SPTLC1O15269 473 aa16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 PAPSS1O43252 624 aaPredicted RBP16.45■□□□□ 0.22
SNRNP70-203ENST00000544278 SUN1O94901 812 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms