RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ITIH2P19823 946 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 SLC1A1P43005 524 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 RANBP1P43487 201 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 NRLP54845 237 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 KLC1Q07866 573 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 DYNC1I2Q13409 638 aaKnown RBP15.69■□□□□ 0.1
CHFR-223ENST00000544268 KCNT1Q5JUK3 1230 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 ZNF677Q86XU0 584 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 RBM12BQ8IXT5 1001 aaKnown RBP15.69■□□□□ 0.1
CHFR-223ENST00000544268 FEZF2Q8TBJ5 459 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 DNAJB3Q8WWF6 145 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 PDZD7Q9H5P4 517 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 RNPEPL1Q9HAU8 725 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 RXFP1Q9HBX9 757 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 CISHQ9NSE2 258 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 FGFR1OP2Q9NVK5 253 aa15.69■□□□□ 0.1
CHFR-223ENST00000544268 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHFR-223ENST00000544268 MAP3K13O43283 966 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 TSPAN1O60635 241 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 MYBL1P10243 752 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 CCNB1P14635 433 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 MMP8P22894 467 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 CDH8P55286 799 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 DYNLT1P63172 113 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 NFX1Q12986 1120 aaKnown RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 LRRC23Q53EV4 343 aaPredicted RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 LIN9Q5TKA1 542 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 PHF13Q86YI8 300 aaPredicted RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 C7orf31Q8N865 590 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 PLVAPQ9BX97 442 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 UPF3AQ9H1J1 476 aaKnown RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 RMI1Q9H9A7 625 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 NXF1Q9UBU9 619 aaKnown RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 NKX1-2Q9UD57 310 aaPredicted RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 CYTH4Q9UIA0 394 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 ARL2BPQ9Y2Y0 163 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 C17orf102A2RUQ5 167 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 TCP11X1B4DZS4 312 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 GOLGA8SH3BPF8 625 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 GOLGA8MH3BSY2 632 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 PDLIM1O00151 329 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 GAS8O95995 478 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 ACADSP16219 412 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 KLRC2P26717 231 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 ZNF132P52740 706 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 BPIFB4P59827 614 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 TMEM154Q6P9G4 183 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 ZNF365Q70YC5 407 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 TRMT10CQ7L0Y3 403 aaKnown RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 SRRM1Q8IYB3 904 aaKnown RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.68■□□□□ 0.1
CHFR-223ENST00000544268 OSMRQ99650 979 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 VCXQ9H320 206 aa15.68■□□□□ 0.1
CHFR-223ENST00000544268 ASS1P00966 412 aaKnown RBP15.67■□□□□ 0.1
CHFR-223ENST00000544268 KRT1P04264 644 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 PDHA1P08559 390 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 PYGBP11216 843 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 SP100P23497 879 aaPredicted RBP15.67■□□□□ 0.1
CHFR-223ENST00000544268 KATNAL2Q8IYT4 538 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 SLITRK1Q96PX8 696 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 PLEKHG4BQ96PX9 1271 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 MTG1Q9BT17 334 aaPredicted RBP15.67■□□□□ 0.1
CHFR-223ENST00000544268 TMEM121Q9BTD3 319 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 TMEM109Q9BVC6 243 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 TRAIPQ9BWF2 469 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 SPC25Q9HBM1 224 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 XPNPEP3Q9NQH7 507 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHFR-223ENST00000544268 SCN10AQ9Y5Y9 1956 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 TMEM191CA6NGB0 347 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 PIK3R2O00459 728 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 PSTPIP1O43586 416 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 ADAMTS4O75173 837 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 TMEM191BP0C7N4 346 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 HOXC8P31273 242 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 RAD23BP54727 409 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 MFSD5Q6N075 450 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 DENND1BQ6P3S1 775 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 FITM2Q8N6M3 262 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 EMC1Q8N766 993 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 UBR7Q8N806 425 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 TRAPPC9Q96Q05 1148 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 STMN4Q9H169 189 aaPredicted RBP15.67■□□□□ 0.1
CHFR-223ENST00000544268 PARVAQ9NVD7 372 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 HMGXB4Q9UGU5 601 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 NAALADL1Q9UQQ1 740 aa15.67■□□□□ 0.1
CHFR-223ENST00000544268 ZSCAN9O15535 394 aaPredicted RBP15.66■□□□□ 0.1
CHFR-223ENST00000544268 TPD52L2O43399 206 aaKnown RBP15.66■□□□□ 0.1
CHFR-223ENST00000544268 LIASO43766 372 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 KPNA6O60684 536 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 CXCL8P10145 99 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 HOXD10P28358 340 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 CCNG2Q16589 344 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 PARP6Q2NL67 630 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 RAB6CQ53S08 254 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 MYLK4Q86YV6 388 aaPredicted RBP15.66■□□□□ 0.1
CHFR-223ENST00000544268 ARFGAP1Q8N6T3 406 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 JOSD2Q8TAC2 188 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 STK32AQ8WU08 396 aa15.66■□□□□ 0.1
CHFR-223ENST00000544268 DYDC1Q8WWB3 177 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms