RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PPP1R10Q96QC0 940 aaKnown RBP15.94■□□□□ 0.14
CHD4-210ENST00000544040 PAFAH2Q99487 392 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 NIF3L1Q9GZT8 377 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 ANXA9O76027 345 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 ERVK-24P63145 666 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 BMPR2Q13873 1038 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 GLRA4Q5JXX5 417 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 OTUD3Q5T2D3 398 aaPredicted RBP15.94■□□□□ 0.14
CHD4-210ENST00000544040 CYP4Z1Q86W10 505 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 OOSP2Q86WS3 158 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 DEFB107AQ8IZN7 70 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 TERB1Q8NA31 727 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 TSEN34Q9BSV6 310 aaKnown RBP15.94■□□□□ 0.14
CHD4-210ENST00000544040 ADAM30Q9UKF2 790 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 ALDH1A2O94788 518 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 FOXO4P98177 505 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 CSHL1Q14406 222 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 TMED8Q6PL24 325 aaPredicted RBP15.94■□□□□ 0.14
CHD4-210ENST00000544040 SENP2Q9HC62 589 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.143e-7■□□□□ 10.6
CHD4-210ENST00000544040 SCAF8Q9UPN6 1271 aaKnown RBP15.94■□□□□ 0.14
CHD4-210ENST00000544040 MFN2O95140 757 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 ALOX12P18054 663 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 ZNF543Q08ER8 600 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 NECAB2Q7Z6G3 386 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 NARS2Q96I59 477 aaKnown RBP15.94■□□□□ 0.14
CHD4-210ENST00000544040 MAN1C1Q9NR34 630 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 PPP1R3GB7ZBB8 358 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 SMAPO00193 183 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 C6orf222P0C671 652 aaPredicted RBP15.94■□□□□ 0.14
CHD4-210ENST00000544040 FAM45BPQ6NSW5 357 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 SCUBE2Q9NQ36 999 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 DDIT4Q9NX09 232 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 MTMR4Q9NYA4 1195 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 CHKBQ9Y259 395 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 CDHR2Q9BYE9 1310 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 CYP7B1O75881 506 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 FAM200BP0CF97 657 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 AGKQ53H12 422 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 SNX30Q5VWJ9 437 aa15.94■□□□□ 0.14
CHD4-210ENST00000544040 ATP7BP35670 1465 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 CYP27B1O15528 508 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 RAP1GAPP47736 663 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
CHD4-210ENST00000544040 KCNV1Q6PIU1 500 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 IGDCC4Q8TDY8 1250 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 GDPD5Q8WTR4 605 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 OLFM1Q99784 485 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 TMEM121Q9BTD3 319 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 COPS7BQ9H9Q2 264 aaPredicted RBP15.93■□□□□ 0.14
CHD4-210ENST00000544040 BCL10O95999 233 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 DSG3P32926 999 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 FNTAP49354 379 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 GEMP55040 296 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 SCARA3Q6AZY7 606 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 SYTL1Q8IYJ3 562 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 KLHL3Q9UH77 587 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 FAM58BPP0C7Q3 252 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 CCDC157Q569K6 752 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 LRRC6Q86X45 466 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 TMEM237Q96Q45 408 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 DCLRE1BQ9H816 532 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 DUSP12Q9UNI6 340 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 MGAT4DA6NG13 374 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 FGFR2P21802 821 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 CASP4P49662 377 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 FAM228AQ86W67 206 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 TPD52L3Q96J77 140 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 YWHAZP63104 245 aaKnown RBP15.93■□□□□ 0.14
CHD4-210ENST00000544040 CAMK2GQ13555 558 aaPredicted RBP15.93■□□□□ 0.14
CHD4-210ENST00000544040 TTLL9Q3SXZ7 439 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 MRNIPQ6NTE8 343 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 CNPY4Q8N129 248 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 ACOX2Q99424 681 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 CDC42EP4Q9H3Q1 356 aaKnown RBP15.93■□□□□ 0.14
CHD4-210ENST00000544040 IPPQ9Y573 584 aa15.93■□□□□ 0.14
CHD4-210ENST00000544040 PSTPIP1O43586 416 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 EDRF1Q3B7T1 1238 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 TAF2Q6P1X5 1199 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 TMEM26Q6ZUK4 368 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 DNAAF5Q86Y56 855 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 SEPT12Q8IYM1 358 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 MTA3Q9BTC8 594 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 HOXD10P28358 340 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 ZNF618Q5T7W0 954 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 C4orf22Q6V702 233 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 ZNF677Q86XU0 584 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 DCP1BQ8IZD4 617 aaKnown RBP15.92■□□□□ 0.14
CHD4-210ENST00000544040 RTL3Q8N8U3 475 aaKnown RBP15.92■□□□□ 0.14
CHD4-210ENST00000544040 RAET1EQ8TD07 263 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 SEPT1Q8WYJ6 367 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 FAR2Q96K12 515 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 UBP1Q9NZI7 540 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 MCM8Q9UJA3 840 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 RFX7Q2KHR2 1363 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 EIF3DO15371 548 aaKnown RBP eCLIP15.92■□□□□ 0.143e-6■■□□□ 11.7
CHD4-210ENST00000544040 NFICP08651 508 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 CUL2Q13617 745 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 RPRD1AQ96P16 312 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms