RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 MSANTD4Q8NCY6 345 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PDZD8Q8NEN9 1154 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ITFG1Q8TB96 612 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 IPO4Q8TEX9 1081 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 STK32AQ8WU08 396 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CPA5Q8WXQ8 436 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PPP1R13BQ96KQ4 1090 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.24■□□□□ 0.036e-7■□□□□ 9.6
TNFRSF1A-216ENST00000543995 ULBP1Q9BZM6 244 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 IL21Q9HBE4 155 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 AVENQ9NQS1 362 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 IL37Q9NZH6 218 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TRPM5Q9NZQ8 1165 aa15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CHORDC1Q9UHD1 332 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-216ENST00000543995 E5RJQ4 531 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ZBED1O96006 694 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 F11P03951 625 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 IL9P15248 144 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CEBPBP17676 345 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SP100P23497 879 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GBP2P32456 591 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PPP3CCP48454 512 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 KCNQ1P51787 676 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 NOMO3P69849 1222 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MRPS5P82675 430 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CYP4F8P98187 520 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TEAD2Q15562 447 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SMAD2Q15796 467 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 HGSNATQ68CP4 663 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 VPS36Q86VN1 386 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ERICH1Q86X53 443 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SHKBP1Q8TBC3 707 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ATXN2LQ8WWM7 1075 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 OVCA2Q8WZ82 227 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MRPS31Q92665 395 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ANP32BQ92688 251 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CPXM1Q96SM3 734 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PCDHB18PQ96TA0 734 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SLC4A5Q9BY07 1137 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MIS12Q9H081 205 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TRPC7Q9HCX4 862 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CYLDQ9NQC7 956 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TLR8Q9NR97 1041 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.23■□□□□ 0.032e-6■■□□□ 12.2
TNFRSF1A-216ENST00000543995 GMIPQ9P107 970 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 IMPACTQ9P2X3 320 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SCML2Q9UQR0 700 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 USP3Q9Y6I4 520 aa15.23■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FAM92AA1XBS5 289 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TADA3O75528 432 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CYP1A1P04798 512 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PLEKP08567 350 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 HNRNPH3P31942 346 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 NSFP46459 744 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ARID5BQ14865 1188 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PTPN20Q4JDL3 420 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CCDC186Q7Z3E2 898 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TMEM150AQ86TG1 271 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TMEM110Q86TL2 294 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SCUBE3Q8IX30 993 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TC2NQ8N9U0 490 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SLC30A5Q8TAD4 765 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CNGB3Q9NQW8 809 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ANAPC1Q9H1A4 1944 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PRUNE2Q8WUY3 3088 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TMCO5BA8MYB1 307 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 NRG2O14511 850 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MOSPD3O75425 235 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FBXO21O94952 628 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ERBB2P04626 1255 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 UNGP13051 313 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 RPL34P49207 117 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CLEC16AQ2KHT3 1053 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GPR158Q5T848 1215 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 WDR59Q6PJI9 974 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 NDRG1Q92597 394 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 FGF13Q92913 245 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 C18orf8Q96DM3 657 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MCRS1Q96EZ8 462 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 SYT11Q9BT88 431 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PHF7Q9BWX1 381 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 DEF6Q9H4E7 631 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ARHGAP20Q9P2F6 1191 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TJP2Q9UDY2 1190 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 NAGPAQ9UK23 515 aa15.22■□□□□ 0.03
TNFRSF1A-216ENST00000543995 XIRP2A4UGR9 3374 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 A0A1W2PQH9 124 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 ZNF840PA6NDX5 716 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 GABBR2O75899 941 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 DDX6P26196 483 aaKnown RBP eCLIP15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PSEN1P49768 467 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 DAOAP59103 153 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 CENPCQ03188 943 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 STXBP5Q5T5C0 1151 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 TXNDC8Q6A555 127 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 PM20D1Q6GTS8 502 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 OR6B2Q6IFH4 312 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 OTOP3Q7RTS5 596 aa15.21■□□□□ 0.03
TNFRSF1A-216ENST00000543995 MON1AQ86VX9 555 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms