RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 PDGFRAP16234 1089 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 SLC5A3P53794 718 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 RPL10AP62906 217 aaKnown RBP22.23■■□□□ 1.15
COMMD5-207ENST00000543949 AMPD2Q01433 879 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 ZNF252P-AS1Q0IIN9 211 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 DUSP4Q13115 394 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 RAB33AQ14088 237 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 ACAP1Q15027 740 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 TMC7Q7Z402 723 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 UBL4BQ8N7F7 174 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 IRGQQ8WZA9 623 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 C17orf80Q9BSJ5 609 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 RXFP1Q9HBX9 757 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 SLC27A5Q9Y2P5 690 aa22.23■■□□□ 1.15
COMMD5-207ENST00000543949 MYO16Q9Y6X6 1858 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 ABLIM3O94929 683 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 VNN2O95498 520 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 USP17L7P0C7H9 530 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 FLT3P36888 993 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 TUFMP49411 452 aaKnown RBP22.22■■□□□ 1.15
COMMD5-207ENST00000543949 DNA2P51530 1060 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 ZNF143P52747 638 aaPredicted RBP22.22■■□□□ 1.15
COMMD5-207ENST00000543949 TAF5Q15542 800 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 DDR2Q16832 855 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 NUP93Q8N1F7 819 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 TTC9BQ8N6N2 239 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 RXFP2Q8WXD0 754 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 GOLGA1Q92805 767 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 KHSRPQ92945 711 aaKnown RBP eCLIP22.22■■□□□ 1.15
COMMD5-207ENST00000543949 USTQ9Y2C2 406 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 USP3Q9Y6I4 520 aa22.22■■□□□ 1.15
COMMD5-207ENST00000543949 CCDC66A2RUB6 948 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 TNFRSF10BO14763 440 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 LILRB3O75022 631 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 RNF8O76064 485 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 CXCL14O95715 111 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 ATF2P15336 505 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 SDC4P31431 198 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 YWHAZP63104 245 aaKnown RBP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 PM20D1Q6GTS8 502 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 SPATA17Q96L03 361 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 TGS1Q96RS0 853 aaKnown RBP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 OSBPL9Q96SU4 736 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 CNPY3Q9BT09 278 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 TRIM62Q9BVG3 475 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 FBXO44Q9H4M3 255 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 ALG13Q9NP73 1137 aaKnown RBP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 ENTPD7Q9NQZ7 604 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 CDC23Q9UJX2 597 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 H0YGN5 161 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 DPYSL4O14531 572 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 DAB1O75553 588 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 CTNNA2P26232 953 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 CTNNA1P35221 906 aaKnown RBP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 GPR15P49685 360 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 POF1BQ8WVV4 589 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 NDRG1Q92597 394 aaKnown RBP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 CD101Q93033 1021 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 CEP295NLQ96MC4 621 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 PSMB7Q99436 277 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 TCF25Q9BQ70 676 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 CRISPLD1Q9H336 500 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 POPDC2Q9HBU9 364 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 MTUS1Q9ULD2 1270 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 MAFFQ9ULX9 164 aa22.21■■□□□ 1.15
COMMD5-207ENST00000543949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.21■■□□□ 1.15
COMMD5-207ENST00000543949 KCNK3O14649 394 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 TEX28O15482 410 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 RTN3O95197 1032 aaPredicted RBP22.2■■□□□ 1.14
COMMD5-207ENST00000543949 ELF1P32519 619 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 SSR1P43307 286 aaKnown RBP22.2■■□□□ 1.14
COMMD5-207ENST00000543949 IFRD2Q12894 506 aaPredicted RBP22.2■■□□□ 1.14
COMMD5-207ENST00000543949 SMC1AQ14683 1233 aaKnown RBP22.2■■□□□ 1.14
COMMD5-207ENST00000543949 CC2D1AQ6P1N0 951 aaPredicted RBP22.2■■□□□ 1.14
COMMD5-207ENST00000543949 DENND5BQ6ZUT9 1274 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 CPNE8Q86YQ8 564 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 SCAMP5Q8TAC9 235 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 SPPL3Q8TCT6 385 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 NCAPGQ9BPX3 1015 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 EMILIN2Q9BXX0 1053 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 TLR9Q9NR96 1032 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 MRFAP1Q9Y605 127 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 IRAK3Q9Y616 596 aa22.2■■□□□ 1.14
COMMD5-207ENST00000543949 PLXNA3P51805 1871 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 YJEFN3A6XGL0 299 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 E7ENQ6 273 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 DDX3YO15523 660 aaKnown RBP22.19■■□□□ 1.14
COMMD5-207ENST00000543949 LPXNO60711 386 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 ARHGEF15O94989 841 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 LTFP02788 710 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 CNPP09543 421 aaKnown RBP22.19■■□□□ 1.14
COMMD5-207ENST00000543949 MATKP42679 507 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 PTPN9P43378 593 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 RAB30Q15771 203 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 SDHAF4Q5VUM1 108 aa22.19■■□□□ 1.14
COMMD5-207ENST00000543949 TRNP1Q6NT89 227 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms