RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 OVCA2Q8WZ82 227 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 ZNF516Q92618 1163 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 FBXO32Q969P5 355 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 DHX58Q96C10 678 aa24.04■■□□□ 1.44
CDKN3-207ENST00000543789 INTS4Q96HW7 963 aaKnown RBP24.04■■□□□ 1.44
CDKN3-207ENST00000543789 BCCIPQ9P287 314 aaKnown RBP eCLIP24.04■■□□□ 1.44
CDKN3-207ENST00000543789 CHORDC1Q9UHD1 332 aaPredicted RBP24.04■■□□□ 1.44
CDKN3-207ENST00000543789 TNFRSF10BO14763 440 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 SPTLC2O15270 562 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 CHRM1P11229 460 aaPredicted RBP24.03■■□□□ 1.44
CDKN3-207ENST00000543789 BYSLQ13895 437 aaKnown RBP24.03■■□□□ 1.44
CDKN3-207ENST00000543789 LY6G5CQ5SRR4 150 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 HECTD3Q5T447 861 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 NELFCDQ8IXH7 590 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 SCFD1Q8WVM8 642 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 SYAP1Q96A49 352 aaPredicted RBP24.03■■□□□ 1.44
CDKN3-207ENST00000543789 OTUB2Q96DC9 234 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 C7orf25Q9BPX7 421 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 XYLT2Q9H1B5 865 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 EVLQ9UI08 416 aaPredicted RBP24.03■■□□□ 1.44
CDKN3-207ENST00000543789 USP24Q9UPU5 2620 aa24.03■■□□□ 1.44
CDKN3-207ENST00000543789 EML5Q05BV3 1969 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 COCHO43405 550 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 ADAM23O75077 832 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 PPP6R2O75170 966 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 GAD2Q05329 585 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 KDSRQ06136 332 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 LMAN2Q12907 356 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 FOXC1Q12948 553 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 UAP1L1Q3KQV9 507 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 TRIM61Q5EBN2 209 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 TMEFF1Q8IYR6 380 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 HMGB4Q8WW32 186 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 KCNK16Q96T55 309 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 UBE4BO95155 1302 aa24.02■■□□□ 1.44
CDKN3-207ENST00000543789 LAMA1P25391 3075 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 CFAP47Q6ZTR5 3102 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 TBC1D3BA6NDS4 549 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 STX6O43752 255 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 PHACTR2O75167 634 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 PREPLQ4J6C6 727 aaPredicted RBP24.01■■□□□ 1.43
CDKN3-207ENST00000543789 SPDYCQ5MJ68 293 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 SNX30Q5VWJ9 437 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 BTBD8Q5XKL5 378 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 SYT12Q8IV01 421 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 PGBD3Q8N328 593 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 FRMD1Q8N878 549 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 SCAMP5Q8TAC9 235 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 KCNV2Q8TDN2 545 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 ZFRQ96KR1 1074 aaKnown RBP24.01■■□□□ 1.43
CDKN3-207ENST00000543789 NUSAP1Q9BXS6 441 aaKnown RBP24.01■■□□□ 1.43
CDKN3-207ENST00000543789 GZF1Q9H116 711 aaPredicted RBP24.01■■□□□ 1.43
CDKN3-207ENST00000543789 TFIP11Q9UBB9 837 aaKnown RBP24.01■■□□□ 1.43
CDKN3-207ENST00000543789 MBD1Q9UIS9 605 aaPredicted RBP24.01■■□□□ 1.43
CDKN3-207ENST00000543789 SH3BP1Q9Y3L3 701 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 ATP8B3O60423 1300 aa24.01■■□□□ 1.43
CDKN3-207ENST00000543789 C1QTNF9BB2RNN3 333 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 C1QTNF9P0C862 333 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 CDH8P55286 799 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 MAP7D1Q3KQU3 841 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 UNQ6494/PRO21346Q6UXR6 183 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 UNC13DQ70J99 1090 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 ARMCX6Q7L4S7 300 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 ABCA7Q8IZY2 2146 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 PHTF2Q8N3S3 785 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 NAT16Q8N8M0 369 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 MED10Q9BTT4 135 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 ZDHHC4Q9NPG8 344 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 FOXD4L1Q9NU39 408 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 IL37Q9NZH6 218 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 CGNQ9P2M7 1197 aaKnown RBP24■■□□□ 1.43
CDKN3-207ENST00000543789 WASF3Q9UPY6 502 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 ANAPC1Q9H1A4 1944 aa24■■□□□ 1.43
CDKN3-207ENST00000543789 TCRBV21S2A2A0A5A6 115 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 DPP6P42658 865 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 PTGER3P43115 390 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 TUBP50607 506 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 EHHADHQ08426 723 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 NUDT18Q6ZVK8 323 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 C12orf56Q8IXR9 622 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 TNIP3Q96KP6 325 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 ZNF396Q96N95 335 aaPredicted RBP23.99■■□□□ 1.43
CDKN3-207ENST00000543789 SMYD3Q9H7B4 428 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 VRTNQ9H8Y1 702 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 TMEM74BQ9NUR3 256 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 COMMD8Q9NX08 183 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 DEC1Q9P2X7 70 aa23.99■■□□□ 1.43
CDKN3-207ENST00000543789 HOXC11O43248 304 aaPredicted RBP23.98■■□□□ 1.43
CDKN3-207ENST00000543789 EXOC3O60645 756 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 SLC5A3P53794 718 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 LYSMD4Q5XG99 296 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 SHC4Q6S5L8 630 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 PAQR9Q6ZVX9 377 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 TRMT11Q7Z4G4 463 aaKnown RBP23.98■■□□□ 1.43
CDKN3-207ENST00000543789 FAM35AQ86V20 835 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 BBS7Q8IWZ6 715 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 ETFBKMTQ8IXQ9 262 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 DEFB124Q8NES8 71 aa23.98■■□□□ 1.43
CDKN3-207ENST00000543789 DUSP9Q99956 384 aaKnown RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms