RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 RPL7AP62424 266 aaKnown RBP11.21□□□□□ -0.61
DDB1-221ENST00000543162 MRPS5P82675 430 aaKnown RBP11.21□□□□□ -0.61
DDB1-221ENST00000543162 MESDQ14696 234 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 EFHC1Q5JVL4 640 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 SDHAF4Q5VUM1 108 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 C11orf63Q6NUN7 778 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 SYT10Q6XYQ8 523 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 SLC26A9Q7LBE3 791 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 NUP93Q8N1F7 819 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 CLEC4CQ8WTT0 213 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 ARNTL2Q8WYA1 636 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 PIWIL1Q96J94 861 aaKnown RBP11.21□□□□□ -0.61
DDB1-221ENST00000543162 BTBD6Q96KE9 485 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 SPATA17Q96L03 361 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 WDR24Q96S15 920 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 TRIM7Q9C029 511 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 IP6K2Q9UHH9 426 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 DNAI1Q9UI46 699 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 LCMT1Q9UIC8 334 aa11.21□□□□□ -0.61
DDB1-221ENST00000543162 HIDE1A8MVS5 230 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 HSF2BPO75031 334 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 GRAP2O75791 330 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 PROSCO94903 275 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 RTN3O95197 1032 aaPredicted RBP11.2□□□□□ -0.62
DDB1-221ENST00000543162 FTCDO95954 541 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 GLI1P08151 1106 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 USP17L7P0C7H9 530 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 CASQ1P31415 396 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 ALDH1A3P47895 512 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 DAOAP59103 153 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 SMAD3P84022 425 aaKnown RBP11.2□□□□□ -0.62
DDB1-221ENST00000543162 MLLT1Q03111 559 aaPredicted RBP11.2□□□□□ -0.62
DDB1-221ENST00000543162 IFRD2Q12894 506 aaPredicted RBP11.2□□□□□ -0.62
DDB1-221ENST00000543162 CAMK1Q14012 370 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 TAF5Q15542 800 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 DNTTIP2Q5QJE6 756 aaKnown RBP11.2□□□□□ -0.62
DDB1-221ENST00000543162 PM20D1Q6GTS8 502 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 SLFN11Q7Z7L1 901 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 TCEAL8Q8IYN2 117 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 SCML4Q8N228 414 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 EMC1Q8N766 993 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 LRRC57Q8N9N7 239 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 JOSD2Q8TAC2 188 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 SCAMP5Q8TAC9 235 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 GPR152Q8TDT2 470 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 IRGQQ8WZA9 623 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 NDRG1Q92597 394 aaKnown RBP11.2□□□□□ -0.62
DDB1-221ENST00000543162 ZNF592Q92610 1267 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 GOLGA1Q92805 767 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 FAM149B1Q96BN6 582 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 TIFAQ96CG3 184 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 CEP295NLQ96MC4 621 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 LMAN2LQ9H0V9 348 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 GOLPH3Q9H4A6 298 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 FBXO44Q9H4M3 255 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 TMEM59LQ9UK28 342 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 YIPF1Q9Y548 306 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
DDB1-221ENST00000543162 CTAGE9A4FU28 777 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 SLC38A8A6NNN8 435 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 YJEFN3A6XGL0 299 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 E7ENQ6 273 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 TGM5O43548 720 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 GLUD1P00367 558 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 SPATA31D3P0C874 917 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 PDGFRAP16234 1089 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 DESP17661 470 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 ATF6P18850 670 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 GPD1P21695 349 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 PSMA2P25787 234 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 YWHAQP27348 245 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 IRS1P35568 1242 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 YWHAZP63104 245 aaKnown RBP11.19□□□□□ -0.62
DDB1-221ENST00000543162 PIGHQ14442 188 aaPredicted RBP11.19□□□□□ -0.62
DDB1-221ENST00000543162 VEPH1Q14D04 833 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 LILRA6Q6PI73 481 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 SPATA31D4Q6ZUB0 917 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 CCDC149Q6ZUS6 474 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 DENND5BQ6ZUT9 1274 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 ARCQ7LC44 396 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 PEX26Q7Z412 305 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 STKLD1Q8NE28 680 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 KIF18AQ8NI77 898 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.19□□□□□ -0.62
DDB1-221ENST00000543162 FNIP1Q8TF40 1166 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 GIPC2Q8TF65 315 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 RXFP2Q8WXD0 754 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.62
DDB1-221ENST00000543162 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
DDB1-221ENST00000543162 TRIM62Q9BVG3 475 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 PRO3102Q9H379 93 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 COMMD8Q9NX08 183 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 EHD2Q9NZN4 543 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 AMFRQ9UKV5 643 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 SCML2Q9UQR0 700 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 JRKLQ9Y4A0 524 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 INSL5Q9Y5Q6 135 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 ALG6Q9Y672 507 aa11.19□□□□□ -0.62
DDB1-221ENST00000543162 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms