RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CTSHP09668 335 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 CHRNA5P30532 468 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 AVPR1AP37288 418 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 MAP3K7CLP57077 242 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 HIST2H2ACQ16777 129 aaPredicted RBP13.54□□□□□ -0.24
TNC-212ENST00000542877 HIST2H2AA3Q6FI13 130 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 GLB1LQ6UWU2 654 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 FAM172AQ8WUF8 416 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 BBS2Q9BXC9 721 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 MTMR12Q9C0I1 747 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 RMND5AQ9H871 391 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 NCKIPSDQ9NZQ3 722 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 CYTH3O43739 400 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 LZTS3O60299 673 aaPredicted RBP13.54□□□□□ -0.24
TNC-212ENST00000542877 RASSF9O75901 435 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 CYP24A1Q07973 514 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 SPDYCQ5MJ68 293 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 MPZL3Q6UWV2 235 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 SLFN11Q7Z7L1 901 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 DDX53Q86TM3 631 aaKnown RBP13.54□□□□□ -0.24
TNC-212ENST00000542877 AENQ8WTP8 325 aaKnown RBP13.54□□□□□ -0.24
TNC-212ENST00000542877 SLC20A1Q8WUM9 679 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 ATG4CQ96DT6 458 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 EPS8L2Q9H6S3 715 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 RNF181Q9P0P0 153 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 ACOT9Q9Y305 439 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 E9PCH4 1651 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 VPS26AO75436 327 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
TNC-212ENST00000542877 DGKDQ16760 1214 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 CCDC142Q17RM4 750 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 FUT11Q495W5 492 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 SLITRK1Q96PX8 696 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 GPRC5CQ9NQ84 441 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 IARS2Q9NSE4 1012 aaKnown RBP13.54□□□□□ -0.24
TNC-212ENST00000542877 SOAT1P35610 550 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 RGS2P41220 211 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 C2CD6Q53TS8 623 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 TRAF7Q6Q0C0 670 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 LRRC8DQ7L1W4 858 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 STRA8Q7Z7C7 330 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 SLC47A2Q86VL8 602 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 SNRNP27Q8WVK2 155 aaKnown RBP13.54□□□□□ -0.24
TNC-212ENST00000542877 DCLK3Q9C098 648 aa13.54□□□□□ -0.24
TNC-212ENST00000542877 RNF103O00237 685 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 ATP9AO75110 1047 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 MAPTP10636 758 aaKnown RBP13.53□□□□□ -0.24
TNC-212ENST00000542877 IMPDH2P12268 514 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 MAPK1P28482 360 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 HPCAP84074 193 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 CCDC15Q0P6D6 951 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 MGAT5BQ3V5L5 792 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
TNC-212ENST00000542877 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 GDF3Q9NR23 364 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 GIMAP4Q9NUV9 329 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 RHBDL2Q9NX52 303 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.53□□□□□ -0.24
TNC-212ENST00000542877 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 OASLQ15646 514 aaKnown RBP13.53□□□□□ -0.24
TNC-212ENST00000542877 PCNX4Q63HM2 1172 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 CHST12Q9NRB3 414 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 NMRK1Q9NWW6 199 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 CLCA2Q9UQC9 943 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 PTPRMP28827 1452 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 SALL3Q9BXA9 1300 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 PRIM2P49643 509 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 ZNF844Q08AG5 666 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 MGAT5Q09328 741 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 NFYCQ13952 458 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 C10orf120Q5SQS8 335 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 ACBD5Q5T8D3 534 aaPredicted RBP13.53□□□□□ -0.24
TNC-212ENST00000542877 CCDC103Q8IW40 242 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
TNC-212ENST00000542877 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 GEMIN8Q9NWZ8 242 aaKnown RBP13.53□□□□□ -0.24
TNC-212ENST00000542877 SYBUQ9NX95 663 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 SAC3D1A6NKF1 404 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 ODC1P11926 461 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 PKN1Q16512 942 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 CENPLQ8N0S6 344 aaPredicted RBP13.53□□□□□ -0.24
TNC-212ENST00000542877 SIKE1Q9BRV8 207 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 BTBD10Q9BSF8 475 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 CYP3A43Q9HB55 503 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
TNC-212ENST00000542877 C6orf222P0C671 652 aaPredicted RBP13.53□□□□□ -0.24
TNC-212ENST00000542877 SOX6P35712 828 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 BCAT1P54687 386 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 SLC34A1Q06495 639 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 ZBTB49Q6ZSB9 765 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 LUZP2Q86TE4 346 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 BLOC1S5Q8TDH9 187 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 ZBTB10Q96DT7 871 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 SH3GL1Q99961 368 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 CTNNAL1Q9UBT7 734 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 RAD54BQ9Y620 910 aa13.53□□□□□ -0.24
TNC-212ENST00000542877 LMTK2Q8IWU2 1503 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms