RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 MCPH1Q8NEM0 835 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 LRRC15Q8TF66 581 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 SNX19Q92543 992 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 ZNF516Q92618 1163 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 FGF11Q92914 225 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 BRF1Q92994 677 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 TMEM176AQ96HP8 235 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 ZNF419Q96HQ0 510 aaPredicted RBP5.15□□□□□ -1.59
LIMS1-214ENST00000542845 ZBTB45Q96K62 511 aaPredicted RBP5.15□□□□□ -1.59
LIMS1-214ENST00000542845 SENP8Q96LD8 212 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 PI4K2AQ9BTU6 479 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 TARS2Q9BW92 718 aaKnown RBP5.15□□□□□ -1.59
LIMS1-214ENST00000542845 OXCT2Q9BYC2 517 aaPredicted RBP5.15□□□□□ -1.59
LIMS1-214ENST00000542845 ZDHHC5Q9C0B5 715 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 LSG1Q9H089 658 aaKnown RBP5.15□□□□□ -1.59
LIMS1-214ENST00000542845 TTC12Q9H892 705 aaPredicted RBP5.15□□□□□ -1.59
LIMS1-214ENST00000542845 NCOA5Q9HCD5 579 aaKnown RBP5.15□□□□□ -1.59
LIMS1-214ENST00000542845 ARHGEF4Q9NR80 690 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 KCNK4Q9NYG8 393 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 GMIPQ9P107 970 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 ZMYM5Q9UJ78 669 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 PCDHA12Q9UN75 941 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 KCNJ14Q9UNX9 436 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 TNFSF13BQ9Y275 285 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 PCDHGA11Q9Y5H2 935 aa5.15□□□□□ -1.59
LIMS1-214ENST00000542845 DNMT3AQ9Y6K1 912 aaPredicted RBP5.15□□□□□ -1.59
LIMS1-214ENST00000542845 PIEZO2Q9H5I5 2752 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 A0A1B0GVT2 93 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ARHGEF35A5YM69 484 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 C2orf78A6NCI8 922 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 E9PAM4 449 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 CBX4O00257 560 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 PPEF2O14830 753 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 BRINP1O60477 761 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 DTNBO60941 627 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ZNF217O75362 1048 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 CYP17A1P05093 508 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 HAPLN1P10915 354 aaPredicted RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ODC1P11926 461 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 NCAM1P13591 858 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 TCF3P15923 654 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 HMGA1P17096 107 aaKnown RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 HDCP19113 662 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ACTN2P35609 894 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 TNFRSF4P43489 277 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 KIR2DL1P43626 348 aaPredicted RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 CSNK1EP49674 416 aaKnown RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 EFNA5P52803 228 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 TMPRSS3P57727 454 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ATP2C1P98194 919 aaPredicted RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 NFKB2Q00653 900 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 BNC1Q01954 994 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ZNF268Q14587 947 aaPredicted RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 KCNB1Q14721 858 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 PPP2R5AQ15172 486 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 DHCR24Q15392 516 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 SLC10A6Q3KNW5 377 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 XKR4Q5GH76 650 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 C10orf76Q5T2E6 689 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 DCAF12L1Q5VU92 463 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 PIK3AP1Q6ZUJ8 805 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 TAS1R3Q7RTX0 852 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 LRRTM3Q86VH5 581 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 C12orf40Q86WS4 652 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 METTL23Q86XA0 190 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 TRIM22Q8IYM9 498 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ADGRG2Q8IZP9 1017 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 THEM5Q8N1Q8 247 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ENGASEQ8NFI3 743 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 OR10T2Q8NGX3 314 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 BAHD1Q8TBE0 780 aaPredicted RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 SCG3Q8WXD2 468 aaKnown RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 AIFM3Q96NN9 605 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ACO2Q99798 780 aaKnown RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 HSD17B14Q9BPX1 270 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 GPR174Q9BXC1 333 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 RNF26Q9BY78 433 aaPredicted RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 CYLDQ9NQC7 956 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 SH3GLB2Q9NR46 395 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ZNF358Q9NW07 568 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 CNTN3Q9P232 1028 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ANKMY1Q9P2S6 941 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 FTSJ1Q9UET6 329 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 SERTAD1Q9UHV2 236 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 EIF2B4Q9UI10 523 aaKnown RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 RAD54BQ9Y620 910 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 KALRNO60229 2985 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 STK36Q9NRP7 1315 aa5.14□□□□□ -1.59
LIMS1-214ENST00000542845 MYO18AQ92614 2054 aaKnown RBP5.14□□□□□ -1.59
LIMS1-214ENST00000542845 ANAPC1Q9H1A4 1944 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 LEFTY2O00292 366 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 BCAT2O15382 392 aaPredicted RBP5.13□□□□□ -1.59
LIMS1-214ENST00000542845 KLK10O43240 276 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 NDUFB5O43674 189 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 LYPLA2O95372 231 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 CSH1P0DML2 217 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 CSH2P0DML3 217 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 CXCL8P10145 99 aa5.13□□□□□ -1.59
LIMS1-214ENST00000542845 MCF2P10911 925 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms