RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ANKMY2Q8IV38 441 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 FAM71DQ8N9W8 422 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 UBA3Q8TBC4 463 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 STK32AQ8WU08 396 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 KIF12Q96FN5 646 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 RNF157Q96PX1 679 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PAFAH2Q99487 392 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 MAK16Q9BXY0 300 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 RPS6KL1Q9Y6S9 549 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF236Q9UL36 1845 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 TCRBV7S3A2A0A539 114 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 H3BRB1 525 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 GOLGA8MH3BSY2 632 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 MDM4O15151 490 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 TM9SF1O15321 606 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 STRNO43815 780 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 EDF1O60869 148 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SPAG7O75391 227 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CSDE1O75534 798 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF286BP0CG31 522 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 DESP17661 470 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CA4P22748 312 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SCNN1AP37088 669 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 MAGEA6P43360 314 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 GAD2Q05329 585 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 KCNJ11Q14654 390 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PCBP1Q15365 356 aaKnown RBP eCLIP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 GRIK4Q16099 956 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 GOLGA7BQ2TAP0 167 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 FAM133BQ5BKY9 247 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SPDYAQ5MJ70 313 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 GJC2Q5T442 439 aaPredicted RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 TMEM110Q86TL2 294 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SESTD1Q86VW0 696 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 UNC93AQ86WB7 457 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 TMEM130Q8N3G9 435 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 LRRC52Q8N7C0 313 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 LRRC8CQ8TDW0 803 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 DCAKDQ8WVC6 231 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 FAF2Q96CS3 445 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF670Q9BS34 389 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SLC4A5Q9BY07 1137 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 TUT1Q9H6E5 874 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 KIF9Q9HAQ2 790 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PAK5Q9P286 719 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 MORF4L1Q9UBU8 362 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 XPO7Q9UIA9 1087 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 UTRNP46939 3433 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PDCD11Q14690 1871 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 BANF1O75531 89 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 FAM155BO75949 473 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CCNB1P14635 433 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SSTR1P30872 391 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 RPA3P35244 121 aaPredicted RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ADCYAP1R1P41586 468 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 BASP1P80723 227 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CDC42EP1Q00587 391 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SLC6A3Q01959 620 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ADCY1Q08828 1119 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ZBTB6Q15916 424 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CCDC14Q49A88 953 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 HP1BP3Q5SSJ5 553 aaPredicted RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 MARCH8Q5T0T0 291 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ARHGAP17Q68EM7 881 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SLC9A4Q6AI14 798 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 DARS2Q6PI48 645 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 C4orf22Q6V702 233 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CAPN12Q6ZSI9 719 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 C3orf62Q6ZUJ4 267 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ARCQ7LC44 396 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PALM2Q8IXS6 379 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 C4orf33Q8N1A6 199 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 FITM2Q8N6M3 262 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 FBF1Q8TES7 1133 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PIWIL1Q96J94 861 aaKnown RBP6.83□□□□□ -1.32
PTPRO-208ENST00000542557 SNX27Q96L92 541 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 RMDN2Q96LZ7 410 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CYTH2Q99418 400 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 C10orf88Q9H8K7 445 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 ECT2Q9H8V3 914 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PNPLA8Q9NP80 782 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 CYLDQ9NQC7 956 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 PHTF1Q9UMS5 762 aa6.83□□□□□ -1.32
PTPRO-208ENST00000542557 BCLAF3A2AJT9 711 aaKnown RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 TOMM70O94826 608 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 MMP3P08254 477 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 CYP2C8P10632 490 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 ALADP13716 330 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 NQO1P15559 274 aaKnown RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 IL4RP24394 825 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 SDC4P31431 198 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 GBP2P32456 591 aaPredicted RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 MSH2P43246 934 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 PTPN9P43378 593 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 GCLCP48506 637 aaPredicted RBP6.82□□□□□ -1.32
PTPRO-208ENST00000542557 MGAT5Q09328 741 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 MMRN1Q13201 1228 aa6.82□□□□□ -1.32
PTPRO-208ENST00000542557 KRT81Q14533 505 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms